Job Description P0CF64 Confidence 98.60% Date Thu Jan 5 11:31:22 GMT 2012 Rank 21 Aligned Residues 97 % Identity 10% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		M	W	T	G	K	K	V	D	S	A	R	A	L	I	A	R	G	W	G	V	S	L	V	S	R	C	L	R	V	S	R	A	Q	L	H	V	I	L	R	R	T	D	D	.	.	W	M	D	G	R	R	S	R	H	T	D	D	T	D	V	L	L	R	I	H	H	V	I	G	E	L	P	T	Y	G	Y	R	R	V	W
Query Conservation																																													.	.
Alig confidence																																													.	.																						.
Template Conservation																																																																				.
Template Sequence		A	L	S	D	T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	.	A	A	S	N	S	C	K	T	A	R	D	I	R
Template Known Secondary structure																	T	T											T												S	G	G	G	T	T										S	S											.
Template Predicted Secondary structure																																																																				.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	R	R	Q	A	E	L	D	G	M	P	A	I	N	A	K	R	V	Y	R	I	M	R	Q	N	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.
Template Sequence		N	E	L	.	.	.	.	.	.	.	.	Q	L	S	A	S	K	R	T	I	L	N	V	I	K	R	S	G
Template Known Secondary structure				T	.	.	.	.	.	.	.	.	T			S												T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.									.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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