 |
| Job Description | P0AA95 | | Confidence | 2.84% | Date | Thu Jan 5 11:12:17 GMT 2012 |
| Rank | 62 | Aligned Residues | 25 |
| % Identity | 28% | Template | c1zp2A_ |
| PDB info |
PDB header:transcription/cell cycle | Chain: A: PDB Molecule:rna polymerase ii holoenzyme cyclin-like subunit; |
PDBTitle: structure of the mediator subunit cyclin c
|
| Resolution | 3.00 Å |
|
| | |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
| Predicted Secondary structure | |
 | |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  | | | |
| | | | | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
F | A | Q | Q | N | Q | W | D | L | S | N | Y | D | T | F | D | M | K | A | L | G | E | D | S | Y | R | D | L | S |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
|
| | | | |
|
|
|
|
|
|
|
|
| |
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | |
| | | | | . | . | . | . | | | | | | | | | | | | | | |
| Template Sequence | |
S | S | Q | L | T | Q | L | F | L | S | T | . |
. |
. |
. |
D | L | E | S | L | E | P | T | C | L | S | K | D | T |
| Template Known Secondary structure | |
| G | G | G | T | G | G | G | S |
| S | . | . | . | . | S |
| T | T | S | S |
|
|
| S |
| | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
| | . | . | . | . | | | | |
|
| | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
8 | . | 10 | . | . | . | . | . | . | . | . | |
|
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
