Job Description Q46755 Confidence 0.96% Date Thu Jan 5 12:34:05 GMT 2012 Rank 83 Aligned Residues 112 % Identity 20% Template c3ddlB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:xanthorhodopsin; PDBTitle: crystallographic structure of xanthorhodopsin, a light-2 driven ion pump with dual chromophore Resolution 1.90 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30										.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																																																			.
Query SS confidence																					.	.	.	.	.	.	.	.	.																																																			.
Query Sequence		L	I	S	I	A	L	S	V	G	L	L	T	L	R	F	W	L	R	Y	.	.	.	.	.	.	.	.	.	Q	K	H	P	Q	A	F	A	R	W	T	R	I	V	P	P	V	V	D	T	L	L	L	L	S	G	I	A	L	M	A	K	A	H	I	L	P	F	S	G	Q	A	Q	W	L	T	E	K	L	F	.	G
Query Conservation																					.	.	.	.	.	.	.	.	.																																																			.
Alig confidence																					.	.	.	.	.	.	.	.	.																																					.	.	.	.											.
Template Conservation																																																																		.	.	.	.
Template Sequence		L	V	V	F	I	A	G	Y	H	Y	F	R	I	T	S	S	W	E	A	A	Y	A	L	Q	N	G	M	Y	Q	P	T	G	E	L	F	N	D	A	Y	R	Y	V	D	W	L	L	T	V	P	L	L	T	V	E	L	V	L	V	M	G	L	P	K	N	.	.	.	.	E	R	G	P	L	A	A	K	L	G	F	L
Template Known Secondary structure																					T					S	S	S					S																											S						.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	I	Y	I	V	L	G	F	I	A	L	D	Y	R	R	M	H	S	Q	Q	A	R	I	I	A	F	P	L	A	L	V	V	L	Y	I	I	I	K	L	A	T	T	K	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	M	I	V	L	G	Y	P	G	E	V	S	E	N	A	A	L	F	G	T	R	G	L	W	G	F	L	S	T	I	P	F	V	W	I	L	Y	I	L	F	T	Q	L	G
Template Known Secondary structure														T		S				S	S	S																						T	T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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