Job Description P0ACB0 Confidence 99.91% Date Thu Jan 5 11:17:46 GMT 2012 Rank 29 Aligned Residues 239 % Identity 20% Template c3hr8A_ PDB info PDB header:recombination Chain: A: PDB Molecule:protein reca; PDBTitle: crystal structure of thermotoga maritima reca Resolution 1.95 Å

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.											.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.																	.	.
Query Sequence		A	D	V	L	D	A	T	V	A	R	I	E	Q	L	F	Q	Q	P	H	D	.	.	.	.	.	.	.	.	.	.	G	V	T	G	V	N	T	G	Y	D	D	L	N	K	K	T	.	.	A	G	L	Q	P	S	D	L	I	I	V	A	A	R	P	S	M	G	K	T	T	F	A	M	N	L	V	E	N	A	A	M
Query Conservation																						.	.	.	.	.	.	.	.	.	.																	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																	.	.																																.
Template Conservation																																																																																	.
Template Sequence		K	S	V	L	E	K	A	L	K	R	I	E	E	N	F	G	K	G	S	I	M	I	L	G	D	E	T	Q	V	Q	P	V	E	V	I	P	T	G	S	L	A	I	D	I	A	T	G	V	G	G	Y	P	R	G	R	I	V	E	I	F	G	Q	E	S	S	G	K	T	T	L	A	L	H	A	I	A	E	A	Q	.
Template Known Secondary structure																		T	T	S	S			T	T			S											S								T	S	S	S	S			T	T								S	T	T	S	S														.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	D	K	P	V	L	I	F	S	L	E	M	P	S	E	Q	I	M	M	R	S	L	A	S	L	S	R	V	D	Q	T	K	I	R	T	G	Q	L	D	D	E	D	W	A	R	I	S	G	T	M	G	I	L	L	E	K	R	N	I	Y	I	D	D	S	S	G	L	T	P	T	E	V	R	S	R	A	R	R	I
Query Conservation
Alig confidence																									.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	M	G	G	V	A	A	F	I	D	A	E	H	A	L	D	P	V	Y	A	K	N	L	.	.	.	.	G	V	D	L	K	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	S	Q	P	D	H	G	E	Q	A	L	E	I	V	D	E	L
Template Known Secondary structure			T	T								S	S												.	.	.	.	T			G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S
Template Predicted Secondary structure																									.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.																													.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.										350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		A	R	E	H	G	G	I	G	L	I	M	I	D	Y	L	Q	L	M	R	.	.	.	.	.	.	.	.	.	V	P	A	L	S	D	N	R	T	L	E	I	A	E	I	S	R	S	L	K	A	L	A	K	E	L	N	V	P	V	V	A	L	S	Q	L	N	R	S	L	E	Q	R	A	D	K	R	P	V	N	S	D
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence						.															.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Conservation						.																																																																									.	.	.
Template Sequence		V	R	S	G	.	V	V	D	L	I	V	V	D	S	V	A	A	L	V	P	R	A	E	I	E	G	A	M	G	D	M	Q	V	G	L	Q	A	R	L	M	S	Q	A	L	R	K	I	A	G	S	V	N	K	S	K	A	V	V	I	F	T	N	Q	I	R	M	K	I	G	V	M	F	G	S	P	E	T	.	.	.
Template Known Secondary structure				T	S	.			S							T	T	T								T	T				S	S		S	S																			T	S	S									S	S	S		S	S	S	S	S		S		S	S	.	.	.
Template Predicted Secondary structure						.																																																																									.	.	.
Template SS confidence
		135	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.														.
Query SS confidence																																				.														.
Query Sequence		L	R	E	S	G	S	I	E	Q	D	A	D	L	I	M	F	I	Y	R	D	E	V	Y	H	E	N	S	D	L	K	G	I	A	E	.	I	I	I	G	K	Q	R	N	G	P	I	G	T	.	V	R	L	T	F	N	G	Q	W	S
Query Conservation																																				.														.
Alig confidence																																				.														.
Template Conservation
Template Sequence		T	T	G	G	L	A	L	K	F	Y	A	T	M	R	M	E	V	R	R	G	E	P	I	K	E	G	K	D	V	I	G	N	V	I	S	V	K	I	V	K	N	K	V	A	P	P	F	K	T	A	Q	T	Y	I	I	Y	G	K	G
Template Known Secondary structure			T										S														T	T															S	S	S												T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions