29 c3hr8A_ Probab=99.91   E-value=2.8e-21  Score=155.90  Aligned_columns=239  Identities=20%

Q ss_pred             HHHHHHHHHHHHHHHHCCCC----------CCCCCCCCHHHHHHHC--CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999999999998736687----------8677427916877750--88778707999576644267999999999998
Q batch____       183 ADVLDATVARIEQLFQQPHD----------GVTGVNTGYDDLNKKT--AGLQPSDLIIVAARPSMGKTTFAMNLVENAAM  250 (471)
Q Consensus       183 ~~~~~~~~~~~e~~~~~~~~----------~~~Gi~Tg~~~LD~~~--gG~~~G~l~vi~g~pg~GKT~l~l~ia~~~a~  250 (471)
                      ...++..++.+++.+.....          +...||||++.||.++  ||+.+|.++.|.|.||+|||+|+++++.+++ 
T Consensus         5 ~~~~~~~~~~i~k~~g~~s~~~~~~~~~~~~~~~i~TG~~~LD~~Lg~GGlp~g~iteI~G~~gsGKTtl~l~~~~~~~-   83 (342)
T c3hr8A_           5 KSVLEKALKRIEENFGKGSIMILGDETQVQPVEVIPTGSLAIDIATGVGGYPRGRIVEIFGQESSGKTTLALHAIAEAQ-   83 (342)
T ss_dssp             HHHHHHHHHHHHHHHCTTSSCCTTCCSCCCCCCEECCSCHHHHHHTSSSSEETTEEEEEEESTTSSHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH-
T ss_conf             9999999999876215430000232200258760337807889850589701660799963888778999999999998-


Q ss_pred             HCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf             56994899988899899999999986299977963379998999999999999851189699708988989999999999
Q batch____       251 LQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTPTEVRSRARRI  330 (471)
Q Consensus       251 ~~~~~vl~~slEm~~~~~~~Rl~a~~~~v~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~l~i~d~~~~t~~~i~~~ir~~  330 (471)
                      ..|..|+|+++|.+......+.+    +++..++                            ......+.++....+.++
T Consensus        84 ~~g~~~~yid~E~~~~~~~~~~l----g~d~~~i----------------------------l~~~~~~~e~~l~~~~~~  131 (342)
T c3hr8A_          84 KMGGVAAFIDAEHALDPVYAKNL----GVDLKSL----------------------------LISQPDHGEQALEIVDEL  131 (342)
T ss_dssp             HTTCCEEEEESSCCCCHHHHHHH----TCCGGGC----------------------------EEECCSSHHHHHHHHHHH
T ss_pred             HCCCEEEEEECCCCCCHHHHHHH----CCCHHHE----------------------------EEEECCCHHHHHHHHHHH
T ss_conf             46985999968887798889860----5993467----------------------------897059989999999998


Q ss_pred             HHHCCCCCEEEEECHHHCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHH
Q ss_conf             9611799889991666512---------6788889899999999999999998189499995037433467788863454
Q batch____       331 AREHGGIGLIMIDYLQLMR---------VPALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSD  401 (471)
Q Consensus       331 ~~~~~~~~lvvID~L~~i~---------~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~ii~lsqlnr~~~~r~~~~p~l~d  401 (471)
                      .+.. .+++||||++..+.         .......+...+...++.|..+|.+++|+|+++.|++............   
T Consensus       132 i~~~-~~~liviDSi~al~~~~~~~~~~~~~~~~~~ar~l~~~l~~L~~~a~~~~~~vi~inq~~~~~~~~~~~~~~---  207 (342)
T c3hr8A_         132 VRSG-VVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARLMSQALRKIAGSVNKSKAVVIFTNQIRMKIGVMFGSPET---  207 (342)
T ss_dssp             HHTS-CCSEEEEECTTTCCCHHHHTTCCCSSCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEEESSSCSSSSSCSCSS---
T ss_pred             HHCC-CCCEEEEECHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCC---
T ss_conf             4105-983899812000273100034432014689999999999999999887397399985011233334557544---


Q ss_pred             HCCHHHHHHHCCEEEEEECCCCCCCCCCCCCEEE-EEEEECCCCCCEE-EEEEEECCCC
Q ss_conf             1450235652797999842432467876687599-9998408998348-9999976973
Q batch____       402 LRESGSIEQDADLIMFIYRDEVYHENSDLKGIAE-IIIGKQRNGPIGT-VRLTFNGQWS  458 (471)
Q Consensus       402 l~gS~~i~~~aD~vl~l~r~~~~~~~~~~~~~~~-l~v~KnR~G~~g~-~~l~f~~~~~  458 (471)
                      ..|..+++..|++.+.+.|......+....+... +.|.|||-.++.. +.+.....++
T Consensus       208 ~~GG~al~~~a~~rl~~~k~~~i~~~~~~~G~~i~v~v~K~k~~~p~~~~~~~~~~~~G  266 (342)
T c3hr8A_         208 TTGGLALKFYATMRMEVRRGEPIKEGKDVIGNVISVKIVKNKVAPPFKTAQTYIIYGKG  266 (342)
T ss_dssp             CTHHHHHHHHCSEEEEEEEEEEEEETTEEEEEEEEEEEEEESSSCCCCEEEEEEETTTB
T ss_pred             CCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCC
T ss_conf             55532000123228999971012577751013899999843467876664204640468