Return to main results Retrieve Phyre Job Id

Job DescriptionP63183
Confidence9.08%DateThu Jan 5 12:07:53 GMT 2012
Rank19Aligned Residues40
% Identity30%Templatec2kn8A_
PDB info PDB header:protein binding, dna binding proteinChain: A: PDB Molecule:dna cleavage and packaging protein large subunit, ul89; PDBTitle: nmr structure of the c-terminal domain of pul89
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290..... ....300........
Predicted Secondary structure 







..
Query SS confidence 


























. .












Query Sequence  NPEAIKNPFFLLAPDWALIPLLIIAAL. . ATVIASQAVISGV
Query Conservation        
 
    
         



..
 





 


 
Alig confidence 


























..












Template Conservation 
      




   

 


 

  



 
 



 

 
Template Sequence  DQNHIEQPFYLMGRDKALAVEQFISRFNSGYIKASQELVSYT
Template Known Secondary structure 

SS



TT
Template Predicted Secondary structure 

















Template SS confidence 









































   1........10.........20.........30.........40..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions