Return to main results Retrieve Phyre Job Id

Job DescriptionP75839
Confidence17.88%DateThu Jan 5 12:14:53 GMT 2012
Rank18Aligned Residues39
% Identity15%Templatec2k1aA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin alpha-iib; PDBTitle: bicelle-embedded integrin alpha(iib) transmembrane segment
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100...
Predicted Secondary structure 





Query SS confidence 






































Query Sequence  DVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLED
Query Conservation    
          

 
     
      
  
      
Alig confidence 






































Template Conservation     
   

 







 




  

  


 




Template Sequence  GALEERAIPIWWVLVGVLGGLLLLTILVLAMWKVGFFKR
Template Known Secondary structure 

SS




TTTT

Template Predicted Secondary structure 









Template SS confidence 






































   957..960.........970.........980.........990.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions