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Job DescriptionP00962
Confidence99.93%DateThu Jan 5 10:57:24 GMT 2012
Rank16Aligned Residues246
% Identity16%Templated1li5a2
SCOP infoAdenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TTVHT. RFPPEPNGYLHIGHAKSICLNFGIAQ. . . . . DYKGQCNLRFDDTN. . . . . . . . . . . . . PVKEDIEYVESIKNDV
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Template Sequence  GEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDF
Template Known Secondary structure  T


BSSS

BT

BB

STT

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   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  EWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGF
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Template Sequence  DALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVAD. . . . . . . . . . . . . . . . . NGDVMFDVPTDPTYGV. . . . . . . . .
Template Known Secondary structure  TT



SB

BGGG
TTS
T.................TS

GGG
TTTTT.........
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   101........110.........120.........130........ .140.........150....
 
   167..170.........180.........190... ......200.........210... ......220.........230.....
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Query Sequence  EEGKACLRAKIDMASPFIVMRDPVLYR. IKFAEHHQTGNKWCIYPMYD. . . . . . . . . . FTHCISDALEGITHSLCTLEFQ
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Template Sequence  . . . . . . . . . . . . LSRQKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENE
Template Known Secondary structure  ............TTT


STT


TTS

B

TT
S
SS
SS
BGGGTTT
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   155....160.........170.........180.........190.........200.........210.........220..
 
   236...240.........250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  DNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIG
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Template Sequence  IAQ. . . . . STCAHDGQYVNYWMHSGMVMVDREKMSKSLGN. . . . . . . . . . . . . . . FFTVRDVLK. YYDAETVRYFLMSGH
Template Known Secondary structure  .....SSS



B

TTB


GGGT
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BT.TS
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   239240. ........250.........260.........270... ......280.. .......290.......
 
   316...320.........330.
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Query Sequence  VTKQDNTIEMASLESC
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Template Sequence  YRS. QLNYSEENLKQA
Template Known Secondary structure  TTS.

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   298.300 .........310..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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