Job Description P00962 Confidence 100.00% Date Thu Jan 5 10:57:24 GMT 2012 Rank 5 Aligned Residues 289 % Identity 25% Template d1j09a2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 1.80

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.									.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.
Query Sequence		V	H	T	R	F	P	P	E	P	N	G	Y	L	H	I	G	H	A	K	S	I	C	L	N	F	G	I	A	Q	D	Y	K	G	Q	C	N	L	R	F	D	D	T	N	P	V	K	E	D	I	E	Y	V	E	S	I	K	N	D	V	E	W	L	G	F	H	W	S	G	.	.	.	.	.	.	.	.	N	V	R	Y
Query Conservation																																																																						.	.	.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	T	R	I	A	P	S	P	T	G	D	P	H	V	G	T	A	Y	I	A	L	F	N	Y	A	W	A	R	R	N	G	G	R	F	I	V	R	I	E	D	T	D	R	A	R	Y	V	P	G	A	E	E	R	I	L	A	A	L	K	W	L	G	L	S	Y	D	E	G	P	D	V	G	G	P	H	G	P	Y	R
Template Known Secondary structure											S	S	S		B																	T	T							B					T	T	S			T	T												T	T				S	B	B	T	T	T	B		T	T				B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	D	Y	F	D	Q	L	H	A	Y	A	I	E	L	I	N	K	G	L	A	Y	V	D	E	L	T	P	E	Q	I	R	E	Y	R	G	T	L	T	Q	P	G	K	N	S	P	Y	R	D	R	S	V	E	E	N	L	A	L	F	E	K	M	R	A	G	G	F	E	E	G	K	A	C	L	R	A	K	I	D	M
Query Conservation
Alig confidence																																							.	.																						.	.	.	.	.	.	.
Template Conservation																																							.	.																						.	.	.	.	.	.	.
Template Sequence		Q	S	E	R	L	P	L	Y	Q	K	Y	A	E	E	L	L	K	R	G	W	A	Y	R	A	F	E	T	P	E	E	L	E	Q	I	R	K	E	.	.	K	G	G	Y	D	G	R	A	R	N	I	P	P	E	E	A	E	E	R	A	R	.	.	.	.	.	.	.	R	G	E	P	H	V	I	R	L	K	V	P	R
Template Known Secondary structure		G	G	G																T	S																		.	.		S	S				G	G	G	G	S											.	.	.	.	.	.	.	T	T											S
Template Predicted Secondary structure																																							.	.																						.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.	150	.	.
		180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		A	S	P	F	I	V	.	.	.	M	R	D	P	V	L	Y	R	I	K	F	A	E	H	H	Q	T	G	N	K	W	C	I	Y	P	M	Y	D	F	T	H	C	I	S	D	A	L	E	G	I	T	H	S	L	C	T	L	E	F	Q	D	N	R	R	L	Y	D	W	V	L	D	N	I	T	I	P	V	H	P	R	Q
Query Conservation								.	.	.
Alig confidence								.	.	.																.																																																			.
Template Conservation																										.																																																			.
Template Sequence		P	G	T	T	E	V	K	D	E	L	R	G	V	V	V	Y	D	N	Q	E	I	P	D	V	.	V	L	L	K	S	D	G	Y	P	T	Y	H	L	A	N	V	V	D	D	H	L	M	G	V	T	D	V	I	R	A	E	E	W	L	V	S	T	P	I	H	V	L	L	Y	R	A	F	G	W	E	.	A	P	R	F
Template Known Secondary structure		S								T	T	T							G	G	G	S				.					T	T	S		B													T	T								G	G	G	G	G	G												T			.
Template Predicted Secondary structure																										.																																																			.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230
		257	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.		.	.	330	.	.
Predicted Secondary structure								.																																																													.	.						.
Query SS confidence								.																																																													.	.						.
Query Sequence		Y	E	F	S	R	L	.	N	L	E	Y	T	V	M	S	K	R	K	L	N	L	L	V	T	D	K	H	V	E	G	W	D	D	P	R	M	P	T	I	S	G	L	R	R	R	G	Y	T	A	A	S	I	R	E	F	C	K	R	I	G	V	T	K	Q	D	N	T	.	.	I	E	M	A	S	.	L	E	S	C	I
Query Conservation								.																																																													.	.						.
Alig confidence								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.						.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	H	M	P	L	L	R	N	P	D	K	T	K	I	S	K	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	T	S	L	D	W	Y	K	A	E	G	F	L	P	E	A	L	R	N	Y	L	C	L	M	G	F	S	M	P	D	G	R	E	I	F	T	L	E	E	F	I	Q	A	F	T
Template Known Secondary structure								B		T	T	S		B			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			B							T	T														S				T	T			S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	D	L	N	E	N	A	P	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	E	R	V	S	L	G	G	P	V	F
Template Known Secondary structure		G	G	G				S			B
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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