Job Description P00962 Confidence 99.16% Date Thu Jan 5 10:57:24 GMT 2012 Rank 36 Aligned Residues 278 % Identity 18% Template d1iq0a2 SCOP info Adenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain Resolution 2.30

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																.																								.	.
Query SS confidence																.																								.	.
Query Sequence		L	A	S	G	K	H	T	T	V	H	T	R	F	P	.	P	E	P	N	G	Y	L	H	I	G	H	A	K	S	I	C	L	N	F	G	I	A	Q	.	.	D	Y	K	G	Q	C	N	L	R	F	D	D	T	N	P	V	K	E	D	I	E	Y	V	E	S	I	K	N	D	V	E	W	L	G	F	H	W	S	G	N
Query Conservation																.																								.	.
Alig confidence					.											.																								.	.																		.	.	.
Template Conservation					.																																																						.	.	.
Template Sequence		F	P	R	.	R	P	G	V	V	L	V	E	H	T	S	V	N	P	N	K	E	L	H	V	G	H	L	R	N	I	A	L	G	D	A	I	A	R	I	L	A	Y	A	G	R	E	V	L	V	L	N	Y	I	D	D	T	G	.	.	.	R	Q	A	A	E	T	L	F	A	L	R	H	Y	G	L	T	W	D	G	K
Template Known Secondary structure					.														T	T	S			B																				T	T											T	T	S	.	.	.													T	T					S	S
Template Predicted Secondary structure					.																																																						.	.	.
Template SS confidence
		98	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
											97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																												.	.																	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																												.	.																	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	V	R	Y	S	S	D	Y	F	D	Q	L	H	A	Y	A	I	E	L	I	N	K	G	L	A	Y	V	D	E	L	T	P	E	Q	I	R	E	Y	R	G	T	L	T	Q	.	.	P	G	K	N	S	P	Y	R	D	R	S	V	E	E	N	L	.	.	.	.	.	.	.	A	L	F
Query Conservation		.	.	.	.	.	.	.	.	.																																												.	.																	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																												.	.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	Y	D	H	F	A	G	R	A	Y	V	R	L	H	Q	D	P	E	Y	E	R	L	Q	P	A	I	E	E	V	L	H	A	L	E	R	G	E	L	R	E	E	V	N	R	I	L	L	A	Q	M	A	T	M	H	A	L	N	A	R	Y	D	L	L	V	W	E	S	D	I	V	R	A	G	L	L	Q	K	A	L
Template Known Secondary structure		S																	T	T	T	G	G	G													T	T	T	T																		T	T				S											T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		159	160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure								.	.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	M	R	A	G	.	.	.	.	.	.	G	F	E	E	G	K	A	C	L	R	A	K	I	D	M	A	S	P	F	I	V	M	R	D	P	V	L	Y	R	I	K	F	A	E	H	H	Q	T	G	N	K	W	C	I	Y	P	M	Y	D	F	T	H	C	I	S	D	A	L	.	.	.	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.																																																											.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.				.										.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.				.
Template Sequence		A	L	L	E	Q	S	P	H	V	F	R	P	R	E	G	K	Y	A	G	A	L	V	M	D	A	S	P	V	I	P	G	L	E	D	P	F	F	V	L	L	R	S	N	G	T	.	.	.	.	.	.	.	.	.	.	.	.	A	T	Y	.	Y	A	K	D	I	A	F	Q	F	W	K	M	G	I	L	E	G	L	R
Template Known Secondary structure					T	T	S	T	T					S	S	S	T	T	T	T							T	T	T	S		S		S									T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	B			.												T	T	S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.				.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.													.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
																											223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.			.	260	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.								.	.									.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.								.	.									.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	I	T	H	S	L	C	T	L	E	F	Q	D	N	R	R	L	Y	D	W	V	L	D	N	I	T	I	P	.	V	H	P	R	Q	Y	E	.	.	F	S	R	L	N	L	E	Y	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.								.	.									.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.								.	.									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	P	Y	E	N	P	Y	Y	P	G	L	R	T	S	A	P	E	G	E	A	Y	T	P	K	A	E	E	T	I	N	V	V	D	V	R	Q	S	H	P	Q	A	L	V	R	A	A	L	A	L	A	G	Y	P	A	L	A	E	K	A	H	H	L	A	Y	E	T	V	L	L	E	G	R	Q	M	S	G	A	V	S
Template Known Secondary structure								S	S		T	T																S								S	S	S														T	T						T	T												T	T	B		S					B
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
															267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	M	S	K	R	K	L	N	L	L	V	T	D	K	H	V	E	G	W	D	D	P	R	M	P	T	I	S	G	L	R	R	R	G	Y	T	A	A	S	I	R	E	F	C	K	R	I	G	V	T	K	Q	D	N	T	I	E	M	A	S	L	E	S	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.
Template Sequence		V	D	E	V	L	E	E	A	T	R	R	A	R	A	I	V	E	E	K	N	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	D	K	E	E	A	A	R	M	.	V	A	L	G	A	I	R	F	S	M	V	K	T	E	P	.	K	K	Q	I	D	F	R	Y	Q	E	A	L	S	F
Template Known Secondary structure																						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S									.													S		T	.	T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.																.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.	.	.	460	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions