Job Description P00962 Confidence 97.61% Date Thu Jan 5 10:57:24 GMT 2012 Rank 53 Aligned Residues 202 % Identity 17% Template c3p0jD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: leishmania major tyrosyl-trna synthetase in complex with tyrosinol,2 triclinic crystal form 1 Resolution 2.89 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.						.	.
Predicted Secondary structure																																																																			.	.	.	.					.	.	.	.	.
Query SS confidence																																																																			.	.	.	.					.	.	.	.	.
Query Sequence		A	E	A	R	P	T	N	F	I	R	Q	I	I	D	E	D	L	A	S	G	K	H	T	T	V	H	T	R	F	P	P	E	P	N	G	Y	L	H	I	G	H	A	K	S	I	C	L	N	F	G	I	A	Q	D	Y	K	G	Q	C	N	L	R	F	D	D	.	.	.	.	T	N	P	V	.	.	.	.	.	K	E
Query Conservation																																																																			.	.	.	.					.	.	.	.	.
Alig confidence																	.	.	.	.														.	.																																.	.	.	.					.	.	.	.	.
Template Conservation																	.	.	.	.														.	.
Template Sequence		E	E	C	I	Q	E	S	E	L	R	N	L	I	E	K	.	.	.	.	K	P	L	I	R	C	Y	D	G	F	E	P	S	.	.	G	R	M	H	I	A	Q	G	I	F	K	A	V	N	V	N	K	C	T	A	A	G	C	E	F	V	F	W	V	A	D	W	F	A	L	M	N	D	K	V	G	G	E	L	E	K
Template Known Secondary structure		S	S		S												.	.	.	.		S	S											.	.	S	S		B																		T																T		S	T	T
Template Predicted Secondary structure																	.	.	.	.														.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.									.	.	.	.
Query SS confidence																							.									.	.	.	.
Query Sequence		D	I	E	Y	V	E	S	I	K	N	D	V	E	W	L	G	F	H	W	S	G	.	N	V	R	Y	S	S	D	Y	.	.	.	.	F	D	Q	L	H	A	Y	A	I	E	L	I	N	K	G	L	A	Y	V	D	E	L	T	P	E	Q	I	R	E	Y	R	G	T	L	T	Q	P	G	K	N	S	P	Y	R	D	R
Query Conservation																							.									.	.	.	.
Alig confidence																							.									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	I	V	G	R	Y	L	I	E	V	W	K	A	A	G	M	D	M	D	K	V	L	F	L	W	S	S	E	E	I	T	S	H	A	D	T	Y	W	R	M	V	L	D	I	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N
Template Known Secondary structure																	T			G	G	G												T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.																																.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	E	E	N	L	A	L	F	E	K	M	R	A	G	G	F	E	E	G	K	A	C	L	R	A	K	I	D	M	A	S	P	F	I	V	M	R	D	P	V	L	Y	R	I	K	F	A	E	H	H	Q	T	G	N	K	W	C	I	Y	P	M	Y	D	F	T	H	C	I	S	D	A	L	E	G	I	T	H	S	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	A	R	I	K	K	C	C	T	I	M	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	G	T	L	T	A	A	Q	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	L	M	Q	C	C	D	I	F	F	L	K	A	D	I	C	Q
Template Known Secondary structure								T	T					T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S			S	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.																	.	.	.	.	.	.	.	.	160	.	.																						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.						.	.
Query SS confidence																																			.						.	.
Query Sequence		C	T	L	E	F	Q	D	N	R	R	L	Y	D	W	V	L	D	N	I	T	I	P	V	H	P	R	Q	Y	E	F	S	R	L	.	N	L	E	Y	T	.	.	V	M	S	K	R	K	L	N	L	L	V	T
Query Conservation																																			.						.	.
Alig confidence																																			.						.	.
Template Conservation
Template Sequence		L	G	L	D	Q	R	K	V	N	M	L	A	R	E	Y	C	D	L	I	G	R	K	L	K	P	V	I	L	S	H	H	M	L	A	G	L	K	Q	G	Q	A	K	M	S	K	S	D	P	D	S	A	I	F
Template Known Secondary structure			B	G	G	G															T										B						S	S	T	T		S	S			S	S		G	G	G	S		B
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions