Job Description P00962 Confidence 99.90% Date Thu Jan 5 10:57:24 GMT 2012 Rank 21 Aligned Residues 278 % Identity 14% Template c3c8zB_ PDB info PDB header:ligase Chain: B: PDB Molecule:cysteinyl-trna synthetase; PDBTitle: the 1.6 a crystal structure of mshc: the rate limiting2 enzyme in the mycothiol biosynthetic pathway Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.															10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.																											.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.																											.	.	.	.	.
Query Sequence		M	S	E	A	E	A	R	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	I	R	Q	I	I	D	E	D	L	A	S	G	K	H	T	T	V	H	T	R	.	F	P	P	E	P	N	G	Y	L	H	I	G	H	A	K	S	I	C	L	N	F	G	I	A	Q	D	.	.	.	.	.	Y	K	G
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.																											.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.								.																											.	.	.	.	.
Template Conservation																																					.	.	.
Template Sequence		M	M	Q	S	W	S	A	P	A	I	P	V	V	P	G	R	G	P	A	L	R	L	F	D	S	A	D	R	Q	V	R	P	V	T	P	.	.	.	G	P	T	A	T	M	Y	V	C	G	I	T	P	Y	D	A	T	H	L	G	H	A	A	T	Y	L	T	F	D	L	V	H	R	L	W	L	D	A	G	H	T	V
Template Known Secondary structure			S												S	S			S							T	T	T	T								.	.	.		S	S										T	T	S			B																				T	T
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70														.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Query Sequence		Q	C	N	L	R	F	D	D	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	K	E	D	I	E	Y	V	E	S	I	K	N	D	V	E	W	L	G	F	H	W	S	G	N	V	R	Y	S	S	D	Y	F	D	Q	L	H	A	Y	A	I	E	L	I	N	K	G	L	A	Y	V	D	E	L	.	.
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Template Conservation
Template Sequence		Q	Y	V	Q	N	V	T	D	V	D	D	P	L	F	E	R	A	E	R	D	G	I	D	W	R	T	L	G	D	R	E	T	Q	L	F	R	E	D	M	A	A	L	R	V	L	P	P	H	D	Y	V	A	A	T	D	A	I	A	E	V	V	E	M	V	E	K	L	L	A	S	G	A	A	Y	I	V	E	D	A	E
Template Known Secondary structure										S												T																					T	T					S					G	G	G																T	S					S		S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
				126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	P	E	Q	I	R	E	Y	R	G	T	L	T	Q	P	G	K	N	S	P	Y	R	D	R	S	V	E	E	N	L	A	L	F	E	K	M	R	A	G	G	F	E	E	G	K	A	C	L	R	A	K	I	D	M	A	S	P	F	I	V	M	R	D	P	V	L	Y	R	I	K	F	A	E	H	H	Q	T	G
Query Conservation		.	.
Alig confidence		.	.			.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	D	V	.	.	.	.	.	.	Y	F	R	A	D	A	T	A	Q	F	G	Y	E	S	G	Y	D	R	D	T	M	L	T	L	F	A	E	R	G	G	D	P	D	R	P	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	Q	L	D	A	L	L	W	R	A	E	R	P	G	E	P	S	W	P
Template Known Secondary structure		S				.	.	.	.	.	.				T	T	S	S	T	T	T	T	T	T	T														T	T			T	T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T										T	T	S			B
Template Predicted Secondary structure						.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.														.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		204	.	.		.	.	.	210	.	.	.											.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure					.								.	.	.	.	.	.	.	.	.	.																																				.	.
Query SS confidence					.								.	.	.	.	.	.	.	.	.	.																																				.	.
Query Sequence		N	K	W	.	C	I	Y	P	M	Y	D	.	.	.	.	.	.	.	.	.	.	F	T	H	C	I	S	D	A	L	E	G	I	T	H	S	L	C	T	L	E	F	Q	D	N	R	R	L	Y	D	W	V	L	D	N	I	.	.	T	I	P	V	H	P	R	Q	Y	E	F	S	R	L	N	L	E	Y	T	V	M	S
Query Conservation					.								.	.	.	.	.	.	.	.	.	.																																				.	.
Alig confidence					.								.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.														.	.
Template Conservation																																							.	.	.	.	.	.
Template Sequence		S	P	F	G	R	G	R	P	G	W	H	V	E	C	S	A	I	A	L	T	R	I	G	T	G	L	D	I	Q	G	G	G	S	D	L	I	F	.	.	.	.	.	.	P	H	H	E	Y	S	A	A	H	A	E	S	V	T	G	E	R	R	F	A	R	H	Y	V	H	T	G	M	I	G	V	L	V	S	Q	L	R
Template Known Secondary structure			T	T		S																	T		T	T								G	G	G	T	T	.	.	.	.	.	.	T																S		S		S								B			B
Template Predicted Secondary structure																																							.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	L	N	L	L	V	T	D	K	H	V	E	G	W	D	D	P	R	M	P	T	I	S	G	L	R	R	R	G	Y	T	A	A	S	I	R	E	F	C	K	R	I	G	V	T	K	Q	D	N	T	I	E	M	A	S	L	E	S	C	I	R	E	D
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		A	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	P	S	A	I	R	L	G	L	F	S	.	G	H	Y	R	E	D	R	F	W	S	N	E	V	L	D	E	A	N	A	R	L
Template Known Secondary structure			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	.	S		T	T	S		B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		305	.	.																													.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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