Job Description P00962 Confidence 96.66% Date Thu Jan 5 10:57:24 GMT 2012 Rank 68 Aligned Residues 228 % Identity 14% Template c2janD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from mycobacterium tuberculosis in2 unliganded state Resolution 2.9 Å

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		35	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure							.																														.	.	.	.	.																										.
Query SS confidence							.																														.	.	.	.	.																										.
Query Sequence		E	P	N	G	Y	.	L	H	I	G	H	A	K	S	I	C	L	N	F	G	I	A	Q	D	Y	K	G	Q	C	N	L	R	F	D	D	.	.	.	.	.	T	N	P	V	K	E	D	I	E	Y	V	E	S	I	K	N	D	V	E	W	L	G	F	H	W	.	S	G	N	V	R	Y	S	S	D	Y	F	D	Q	L
Query Conservation							.																														.	.	.	.	.																										.
Alig confidence							.								.																						.	.	.	.	.																										.
Template Conservation															.
Template Sequence		D	P	T	A	P	S	L	H	A	G	H	L	V	.	P	L	L	T	L	R	R	F	Q	R	A	G	H	R	P	I	V	L	A	G	G	A	T	G	M	I	G	D	T	V	A	E	W	T	E	R	I	R	G	Q	L	E	R	F	V	D	F	D	D	S	P	M	G	A	I	V	E	N	N	L	E	W	T	G	S	L
Template Known Secondary structure			T	T	S	S	S		B	G	G	G			.											T	T																																	S				S	S	T	T							T					T	T
Template Predicted Secondary structure															.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	Y	A	I	E	L	I	N	K	G	L	A	Y	V	D	E	L	T	P	E	Q	I	R	E	Y	R	G	T	L	T	Q	P	G	K	N	S	P	Y	R	D	R	S	V	E	E	N	L	A	L	F	E	K	M	R	A	G	G	F	E	E	G	K	A	C	L	R	A	K	I	D	M	A	S	P	F	I	V	M	R
Query Conservation
Alig confidence			.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	.	A	I	E	F	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	G	K	H	F	S	V	N	V	M	L	A	R	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	R	R	L	A	G	E	G	I	S	Y	T
Template Known Secondary structure			.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	G	G	G								S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure			.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132		.	.	.	.	.	.																													.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																.	.	.	.	.	160	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		D	P	V	L	Y	R	I	K	F	A	E	H	H	Q	T	G	N	K	W	C	I	Y	P	M	Y	D	F	T	H	C	I	S	D	A	L	E	G	I	T	H	S	L	C	T	L	E	F	Q	D	N	R	R	L	Y	D	W	V	L	D	N	I	T	I	P	V	H	P	R	Q	Y	E	F	S	R	L	.	N	L	E	Y
Query Conservation																																																																													.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																													.											.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																													.
Template Sequence		E	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	L	L	Q	A	N	D	Y	V	E	L	H	R	R	H	.	.	G	C	T	L	Q	I	G	G	A	D	Q	W	G	N	I	I	A	G	V	R	L	V	R	Q	K	L	G	A	.	T	V	H	A	L	T	V	P	L	V	T	A	A	D	G
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.									G	G	G																		.											B		T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																													.
Template SS confidence
		168	.	170																.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.							.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		T	V	M	S	K	R	K	L	N	L	L	V	T	D	K	H	V	E	G	W	D	D	P	R	M	P	T	I	S	G	L	R	R	R	G	Y	T	A	A	S	I	R	E	F	C	K	R	I	G	V	T	.	.	.	.	.	.	K	Q	D	N	T	I	E	M	A	S	L	E	S	C	I	R	E	D	L	N	E	N	A
Query Conservation																																																					.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	F	G	K	S	.	.	.	.	.	.	T	G	G	G	S	L	W	L	D	P	Q	M	.	.	.	.	.	.	.	.	.	.	.	T	S	P	Y	A	W	Y	Q	Y	F	V	N	T	A	D	A	D	V	I	R	Y	L	R	W	F	T	F	L	S	A	D	E	L	A	E	L	E	Q	A	T	A	Q	R	P	Q
Template Known Secondary structure			B	T	T	B		.	.	.	.	.	.	T	T	S		B		B	S	S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	S											T			T	T	T									S																		G	G
Template Predicted Secondary structure								.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.							.	.	.	.	240	.	.	.	.	.	.	.												.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		341	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		293	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions