Job Description P00962 Confidence 98.31% Date Thu Jan 5 10:57:24 GMT 2012 Rank 42 Aligned Residues 94 % Identity 27% Template c1wkbA_ PDB info PDB header:ligase Chain: A: PDB Molecule:leucyl-trna synthetase; PDBTitle: crystal structure of leucyl-trna synthetase from the2 archaeon pyrococcus horikoshii reveals a novel editing3 domain orientation Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.
Predicted Secondary structure																															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	T	R	F	P	P	E	P	N	G	Y	L	H	I	G	H	A	K	S	I	C	L	N	F	G	I	A	Q	.	.	D	Y	K	G	Q	C	N	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	I	T	V	A	F	P	Y	L	S	G	H	L	H	V	G	H	A	R	T	Y	T	I	P	D	V	I	A	R	F	K	R	M	Q	G	Y	N	V	L	F	P	M	A	W	H	I	T	G	S	P	I	V	G	I	A	E	R	I	K	N	R	D	P	K	T	I	W	I	Y	R	D	V	Y	K	V	P	E	E	I	L
Template Known Secondary structure									B	T	T	S			B																					T									B	B			B	S											T	T											T	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																												.	.												.	.	.	.
Query SS confidence																												.	.												.	.	.	.
Query Sequence		F	D	D	T	N	P	V	K	E	D	I	E	Y	V	E	S	I	K	N	D	V	E	W	L	G	F	.	.	H	W	S	G	N	V	R	Y	S	S	D	.	.	.	.	Y	F	D	Q	L	H	A	Y	A	I	E	L	I	N	K	G	L	A	Y	V
Query Conservation																												.	.												.	.	.	.
Alig confidence																												.	.				.								.	.	.	.
Template Conservation																																	.
Template Sequence		W	T	F	E	D	P	I	N	I	V	K	Y	F	M	K	A	A	K	E	T	F	I	R	A	G	F	S	V	D	W	S	.	R	E	F	Y	T	T	S	L	F	P	P	F	S	K	F	I	E	W	Q	F	W	K	L	K	E	K	G	Y	I	V	K
Template Known Secondary structure			G	G	G	S																			T	T					G	G	.	G			B		S	T	T	S																	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions