Job Description P00962 Confidence 97.55% Date Thu Jan 5 10:57:24 GMT 2012 Rank 55 Aligned Residues 192 % Identity 19% Template c1h3eA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from thermus thermophilus complexed2 with wild-type trnatyr(gua) and with atp and tyrosinol Resolution 2.90 Å

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		35	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.						.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.		.
Predicted Secondary structure							.																			.								.	.	.	.	.					.	.	.	.	.																					.	.	.	.	.								.
Query SS confidence							.																			.								.	.	.	.	.					.	.	.	.	.																					.	.	.	.	.								.
Query Sequence		E	P	N	G	Y	.	L	H	I	G	H	A	K	S	I	C	L	N	F	G	I	A	Q	D	.	Y	K	G	Q	C	N	L	.	.	.	.	.	R	F	D	D	.	.	.	.	.	T	N	P	V	K	E	D	I	E	Y	V	E	S	I	K	N	D	V	E	W	.	.	.	.	.	L	G	F	H	W	S	G	.	N
Query Conservation							.																			.								.	.	.	.	.					.	.	.	.	.																					.	.	.	.	.								.
Alig confidence							.																			.								.	.	.	.	.					.	.	.	.	.																					.	.	.	.	.								.
Template Conservation
Template Sequence		D	P	T	R	P	D	L	H	L	G	H	A	V	V	L	R	K	M	R	Q	F	Q	E	L	G	H	K	V	V	L	I	I	G	D	F	T	G	M	I	G	D	P	S	G	R	S	K	T	R	P	P	L	T	L	E	E	T	R	E	N	A	K	T	Y	V	A	Q	A	G	K	I	L	R	Q	E	P	H	L	F	E
Template Known Secondary structure				S	S	S			B															T	T	T									T	T								S	S		S	S																						T	T	T	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		97	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		V	R	Y	S	S	D	Y	F	D	Q	.	.	L	H	A	Y	A	I	E	L	I	N	K	G	L	A	Y	V	D	E	L	T	P	E	Q	I	R	E	Y	R	G	T	L	T	Q	P	G	K	N	S	P	Y	R	D	R	S	V	E	E	N	L	A	L	F	E	K	M	R	A	G	G	F	E	E	G	K	A	C	L	R
Query Conservation												.	.
Alig confidence												.	.							.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	Y	N	S	E	W	L	E	G	L	T	F	K	E	V	V	R	.	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	M	T	V	A	Q	M	L	E	R	E	D	F	K	K	R	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T					T	T									.		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S						T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.																										.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	I	D	M	A	S	P	F	I	V	M	R	D	P	V	L	Y	R	I	K	F	A	E	H	H	Q	T	G	N	K	W	C	I	Y	P	M	Y	D	F	T	H	C	I	S	D	A	L	E	G	I	T	H	S	L	C	T	L	E	F	Q	D	N	R	R	L	Y	D	W	V	L	D	N	I	T	I	P	V	H	P
Query Conservation
Alig confidence		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	G	I	P	I	S	L	H	E	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	F	A	Q	A	Y	D	S	V	A	I	.	.	.	.	.	.	R	A	D	V	E	M	G	G	T	D	Q	R	F	N	L	L	V	G	R	E	V	Q	R	A	Y	G	Q	S	P	Q	V
Template Known Secondary structure		.	.	.	.	.	T	T					G	G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	.	.	.	.	.	.	T		S						G	G	G														T	T
Template Predicted Secondary structure		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
							164	.	.	.	.	.	170	.	.	.	.																.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		R	Q	Y	E	F	S	R	L	N	L	E	Y	T	.	V	M	S	K	R	K	L	N	L	L	V	T	D	K	H	V	E	G	W	D	D	P	R	M	P	T	I	S	G	L	R	R	R	G	Y	T	A	A	S	I	R	E	F	C	K	R	I
Query Conservation															.
Alig confidence															.						.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	F	L	M	P	L	L	V	G	L	D	G	R	E	K	M	S	K	S	.	.	.	.	.	.	.	L	D	N	Y	I	G	L	T	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	A	M	F	K	K	L	M	R	V
Template Known Secondary structure									B		T	T	S	S	S	B			T	T	.	.	.	.	.	.	.	T	T				B	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.															.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions