Job Description P00962 Confidence 98.34% Date Thu Jan 5 10:57:24 GMT 2012 Rank 41 Aligned Residues 102 % Identity 29% Template c1gaxB_ PDB info PDB header:ligase/rna Chain: B: PDB Molecule:valyl-trna synthetase; PDBTitle: crystal structure of thermus thermophilus valyl-trna2 synthetase complexed with trna(val) and valyl-adenylate3 analogue Resolution 2.90 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.										.	.
Predicted Secondary structure																																						.	.																	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.																	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	G	K	H	T	T	V	H	T	R	F	P	P	E	P	N	G	Y	L	H	I	G	H	A	K	S	I	C	L	N	F	G	I	A	Q	.	.	D	Y	K	G	Q	C	N	L	R	F	D	D	T	N	P	V	.	.	.	.	.	.	.	.	.	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.																	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.																	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	G	K	P	P	F	V	I	F	M	P	P	P	N	V	T	G	S	L	H	M	G	H	A	L	D	N	S	L	Q	D	A	L	I	R	Y	K	R	M	R	G	F	E	A	V	W	L	P	G	T	D	H	A	G	I	A	T	Q	V	V	V	E	R	L	L	L	K	E	G	K	T	R	H	D	L	G	R	E	K
Template Known Secondary structure		S		S	S											B	S	S	S																							T	T	S									B			T									T	T	T	T	T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
										75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		.	.	.	.	.	.	.	.	D	I	E	Y	V	E	S	I	K	N	D	V	E	W	L	G	F	H	W	S	.	.	.	G	N	V	R	Y	S	S	D	Y	F	D	Q	L	H	A	Y	A	I	E	L	I	N	K	G	L	A	Y	V
Query Conservation		.	.	.	.	.	.	.	.																					.	.	.
Alig confidence		.	.	.	.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		F	L	E	R	V	W	Q	W	K	E	E	S	G	G	T	I	L	K	Q	L	K	R	L	G	A	S	A	D	W	S	R	E	A	F	T	M	D	E	K	R	S	R	A	V	R	Y	A	F	S	R	Y	Y	H	E	G	L	A	Y	R
Template Known Secondary structure																								T	T					G	G	G				T	T	S																T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions