 |
Job Description | P31806 | Confidence | 90.80% | Date | Thu Jan 5 11:48:44 GMT 2012 |
Rank | 72 | Aligned Residues | 78 |
% Identity | 26% | Template | d1j6ua1 |
SCOP info | MurCD N-terminal domain
| MurCD N-terminal domain
| MurCD N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
73 | . | . | . | . | . | . | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | D | G | Y | V | V | . |
A | R | L | A | K | A | V | G | I | E | V | T | L | L | A | Q | E | S | D | K | P | L | P | E | E | A | A | L | A | R | E | A | W | L | N | A | G | G | E | I | H | . |
A | S | N | I | V | W | P | E | S | V | D | L | I | V | D | A | L | L | G | T | G | L | R | Q | A | P | R | E | S | I |
Query Conservation |   |
|
|
|
|
|
|   | . |
|
|   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
| . |
|
Template Conservation |   |
|   |
|
|   |
|
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|
| . | . | . | . | . | . | . |   |
|
|
|
|   |   | . |   |
Template Sequence |   |
G | G | I | G | X | S | A | V | A | L | H | E | F | S | N | G | N | D | V | Y | G | S | N | I | E | E | T | E | . |
. |
. |
. |
. |
. |
. |
. |
R | T | A | Y | L | R | K | L | G | I | P | I | F | V | P | H | S | A | D | N | W | Y | D | P | D | L | V | I | . |
. |
. |
. |
. |
. |
. |
K | T | P | A | V | R | D | . |
D |
Template Known Secondary structure |   |
T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | T | T |
|
|  |  | S | S |
|
| T | T | S |
|
|
|
| S |  |  |  | . | . | . | . | . | . | . |  |
| T | T |
|
| T | . | T |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . |  |
|
|
|
|
|
| . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 70 | . | |
. |
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | L | I | D | H | A | N | S | H | P | A | P | I | V | A |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|   |   |   |
|
|
|
|   |
|
Template Sequence |   |
N | P | E | I | V | R | A | R | X | E | R | V | P | I | E | N |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | T |
|
|  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|