Job Description P31806 Confidence 84.13% Date Thu Jan 5 11:48:44 GMT 2012 Rank 107 Aligned Residues 114 % Identity 16% Template c3shoA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) Resolution 1.80 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	D	I	R	R	G	E	R	E	A	A	D	V	L	G	L	T	L	Y	E	L	M	L	R	A	G	E	A	A	F	Q	V	C	R	S	A	Y	P	D	A	R	H	W	L	V	L	C	G	H	G	N	N	G	G	D	G	Y	V	V	A	R	L	A	K	A	V	G	I	E	V	T	L	L	A	Q	E	S	D	K
Query Conservation
Alig confidence																.	.	.	.	.	.	.																		.					.
Template Conservation																.	.	.	.	.	.	.																		.					.
Template Sequence		P	V	Q	V	F	T	N	D	I	E	N	L	N	Q	.	.	.	.	.	.	.	T	L	N	Q	T	Q	P	E	A	I	E	A	A	V	E	A	I	.	R	A	D	H	.	V	I	V	V	G	X	G	F	S	A	A	V	A	V	F	L	G	H	G	L	N	S	L	G	I	R	T	T	V	L	T	E	G	G	S	T
Template Known Secondary structure																.	.	.	.	.	.	.				T														.			S		.							G	G	G														T	T										T
Template Predicted Secondary structure																.	.	.	.	.	.	.																		.					.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	P	E	E	A	A	L	A	R	E	A	W	L	N	A	G	G	E	I	H	A	S	N	I	V	W	P	E	S	V	D	L	I	V	D	A	L	L	G	T	G	L	R	Q	A	P	R	E	S	I	S	Q	L	I	D	H	A	N	S	H	P	A	P	I	V	A	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		.	.	.	.	.	.	.	.	L	T	I	T	L	A	N	L	R	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	X	I	G	V	S	V	W	R	Y	L	R	D	.	T	V	A	A	L	A	G	A	A	E	R	G	V	P	T	X	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.							T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S					.											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
										173	.	.	.	.	.	.	180	.	.	.																	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions