Job Description P31806 Confidence 99.95% Date Thu Jan 5 11:48:44 GMT 2012 Rank 14 Aligned Residues 227 % Identity 17% Template c3rm5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:hydroxymethylpyrimidine/phosphomethylpyrimidine kinase PDBTitle: structure of trifunctional thi20 from yeast Resolution 2.68 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		W	L	K	P	R	R	P	T	S	H	K	G	D	H	G	R	L	V	I	I	G	G	D	H	G	T	A	G	A	I	R	M	T	G	E	A	A	L	R	A	.	.	.	.	G	A	G	L	V	R	V	L	T	R	S	E	N	I	A	P	L	L	T	A	R	P	E	L	M	V	H	E	L	T	M	D	S	L	T	E
Query Conservation																																										.	.	.	.
Alig confidence																																										.	.	.	.																								.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		T	P	P	P	Y	L	T	L	A	C	N	E	K	L	P	T	V	L	S	I	A	G	T	D	P	S	G	G	A	G	I	E	A	D	V	K	T	I	T	A	H	R	C	Y	A	M	T	C	I	T	A	L	N	A	Q	T	P	V	K	V	Y	S	I	N	N	T	P	.	.	.	K	E	V	V	F	Q	T	L	E	S
Template Known Secondary structure					T	T	G	G	G	G	T	T														T	T	S	S	S												T	T								S	B						S	S							B			.	.	.
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.					.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.								.	.	.	.																																				.
Query SS confidence																																.	.	.								.	.	.	.																																				.
Query Sequence		S	L	E	W	A	D	V	V	V	I	G	P	G	L	G	Q	Q	E	W	G	K	K	A	L	Q	K	V	E	N	F	.	.	.	R	K	P	M	L	W	D	.	.	.	.	A	D	A	L	N	L	L	A	I	N	P	D	K	R	H	N	R	V	I	T	P	H	P	G	E	A	A	R	L	L	G	C	S	V	A	.
Query Conservation																																.	.	.								.	.	.	.																																				.
Alig confidence																																.	.	.								.	.	.	.																																				.
Template Conservation
Template Sequence		N	L	K	D	M	K	C	N	V	I	K	T	G	M	L	T	A	A	A	I	E	V	L	H	E	K	L	L	Q	L	G	E	N	R	P	K	L	V	V	D	P	V	L	V	A	K	D	I	V	S	L	I	T	E	K	V	A	P	F	A	D	I	L	T	P	N	I	P	E	C	Y	K	L	L	G	E	E	R	K	V
Template Known Secondary structure						S			S						S																	G	G	G																							T	G	G	G		S					B								T	T	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.			.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																					.								.	.										.	.
Query SS confidence																					.								.	.										.	.
Query Sequence		E	I	E	S	D	R	L	H	C	A	K	R	L	V	Q	R	Y	G	G	.	V	A	V	L	K	G	A	.	.	G	T	V	V	A	A	H	P	D	.	.	A	L	G	I	I	D	A	G	N	A	G	M	A	S	G	G	M	G	D	V	L	S	G	I	I	G	A	L	L	G	Q	K	L	S	P	Y	D	A	A	C
Query Conservation																					.								.	.										.	.
Alig confidence																					.								.	.										.	.
Template Conservation
Template Sequence		N	G	L	Q	D	I	F	Q	I	A	K	D	L	A	K	I	T	K	C	S	N	I	L	V	K	G	G	H	I	T	D	V	L	F	L	G	A	E	Q	K	F	I	I	F	K	G	N	F	V	N	T	T	H	T	H	G	T	G	C	T	L	A	S	A	I	A	S	N	L	A	R	G	Y	S	L	P	Q	S	V	Y
Template Known Secondary structure		S	S																		S																T	T	T	T													S			B	T																T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		464	.	.		.	.	.	470
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	G	C	.	V	A	H	G
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		G	G	I	E	Y	V	Q	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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