Job Description P31806 Confidence 99.93% Date Thu Jan 5 11:48:44 GMT 2012 Rank 16 Aligned Residues 250 % Identity 15% Template c3nm3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes Resolution 3.10 Å

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		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																							.	.	.																												.
Query SS confidence																																							.	.	.																												.
Query Sequence		I	G	G	D	H	G	T	A	G	A	I	R	M	T	G	E	A	A	L	R	A	G	A	G	L	V	R	V	L	T	R	S	E	N	I	A	P	.	.	.	L	L	T	A	R	P	E	L	M	V	H	E	L	T	M	D	S	L	T	E	S	L	E	W	A	D	V	.	V	V	I	G	P	G	L	G	Q	Q	E	W
Query Conservation																																							.	.	.																												.
Alig confidence																																							.	.	.																												.
Template Conservation
Template Sequence		S	T	K	N	S	L	T	T	T	D	E	I	Q	S	I	I	S	N	T	L	K	A	R	P	L	V	Q	H	I	T	N	K	V	H	Q	N	F	G	A	N	V	T	L	A	L	G	S	S	P	I	M	S	E	I	Q	S	E	V	N	D	L	A	A	I	P	H	A	T	L	L	L	N	T	G	S	V	A	P	P	E
Template Known Secondary structure						S																	S																							T	T									T	T	T					T	T	S	T	T							S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		336	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.						.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																	.	.	.	.	.
Query SS confidence							.																	.	.	.	.	.
Query Sequence		G	K	K	A	L	.	Q	K	V	E	N	F	R	K	P	M	L	W	D	A	D	A	.	.	.	.	.	L	N	L	L	A	I	N	P	D	K	R	H	N	R	V	I	T	P	H	P	G	E	A	A	R	L	L	G	C	S	V	A	E	I	E	S	D	R	L	H	C	A	K	R	L	V	Q	R	Y	G	G	V	A
Query Conservation							.																	.	.	.	.	.
Alig confidence							.																	.	.	.	.	.																															.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		M	L	K	A	A	I	R	A	Y	N	D	V	K	R	P	I	V	F	D	P	V	G	A	T	E	T	R	L	L	L	N	N	K	L	L	T	F	G	Q	F	S	C	I	K	G	N	S	S	E	I	L	G	L	A	E	L	S	.	.	.	.	N	E	L	L	I	Q	A	T	K	I	V	A	F	K	Y	K	T	V	A
Template Known Secondary structure													T	T																						T	T	S	S			S														T			.	.	.	.															T	T	S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.					.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.											.	.	.	.	.	.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.				.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																.																					.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.																.																					.	.	.
Query Sequence		V	L	K	G	A	G	T	V	V	A	A	H	.	.	.	.	.	.	.	.	.	.	P	D	A	L	G	I	I	D	A	G	N	A	G	M	A	.	S	G	G	M	G	D	V	L	S	G	I	I	G	A	L	L	G	Q	K	L	.	.	.	S	P	Y	D	A	A	C	A	G	C	V	A	H	G	A	A	A	D	V
Query Conservation														.	.	.	.	.	.	.	.	.	.																.																					.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																.																					.	.	.
Template Conservation
Template Sequence		V	C	T	G	E	F	D	F	I	A	D	G	T	I	E	G	K	Y	S	L	S	K	G	T	N	G	T	S	V	E	D	I	P	C	V	A	V	E	A	G	P	I	G	C	S	L	G	S	T	I	A	C	M	I	G	G	Q	P	S	E	G	N	L	F	H	A	V	V	A	G	V	M	L	Y	K	A	A	G	K	I
Template Known Secondary structure					S	S	S								G	G	G	B			S	S	S		S	S	S			G	G	G	S						B																					T	T
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	R	F	G	T	R	G	M	L	A	T	D	L	F	S	T	L	Q	R	I	V	N	P	E	V	T	D	K	N	H	D	E	S	S	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	E	K	C	N	G	S	G	S	F	Q	V	E	L	I	D	A	L	Y	R	L	T	R	E	N	T	P	V	T	W	A	P	K	L	T	H	T
Template Known Secondary structure							S	S																		S			G	G	G				B			B
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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