Job Description P31806 Confidence 99.79% Date Thu Jan 5 11:48:44 GMT 2012 Rank 20 Aligned Residues 249 % Identity 16% Template c3mbjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative phosphomethylpyrimidine kinase; PDBTitle: crystal structure of a putative phosphomethylpyrimidine kinase2 (bt_4458) from bacteroides thetaiotaomicron vpi-5482 at 2.10 a3 resolution (rhombohedral form) Resolution 2.10 Å

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		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.							320	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.
Query Sequence		S	H	K	G	D	H	G	R	L	V	I	I	G	G	D	H	G	T	A	G	A	I	R	M	T	G	E	A	A	L	R	A	G	A	G	L	V	R	V	L	T	R	S	E	N	I	A	P	L	L	T	A	R	P	E	L	M	V	H	E	L	T	M	D	S	L	T	E	S	L	E	.	.	.	.	.	.	W	A	D
Query Conservation																																																																									.	.	.	.	.	.
Alig confidence																																				.	.																																				.	.	.	.	.	.
Template Conservation																																				.	.
Template Sequence		X	Y	A	N	K	V	K	K	I	A	A	V	H	D	L	S	G	X	G	R	V	S	L	T	V	V	I	P	I	L	S	S	X	G	.	.	F	Q	V	C	P	L	P	T	A	V	L	S	N	H	T	Q	Y	P	G	F	S	F	L	D	L	T	D	E	X	P	K	I	I	A	E	W	K	K	L	E	V	Q	F	D
Template Known Secondary structure			S			S	S													S	S		T											T	T	.	.								S							T	T	S	S								T	T	T												T				S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.				350	.	.	.	.													.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	V	I	G	P	G	L	G	Q	Q	E	W	G	K	K	A	L	Q	K	V	E	N	F	R	K	P	.	.	.	M	L	W	D	A	.	.	.	.	.	.	.	.	.	.	.	.	D	A	L	N	L	L	A	I	N	P	D	K	R	H	N	R	V	I	T	P	H	P	G	E	A	A	R	L	L	G	C	S	V
Query Conservation																													.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																					.	.	.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		A	I	Y	T	G	Y	.	L	G	S	P	R	Q	I	Q	I	V	S	D	F	I	K	D	F	R	Q	P	D	S	L	I	V	A	D	P	V	L	G	D	N	G	R	L	Y	T	N	F	D	X	E	X	V	K	E	X	R	H	L	I	T	K	A	D	V	I	T	P	N	L	T	E	L	F	Y	L	L	D	E	P	Y
Template Known Secondary structure								.			S																	T	T												T	T				T	T														T	T		S					B									T
Template Predicted Secondary structure								.
Template SS confidence
		79	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		388			.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.								.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																												.	.	.	.	.	.	.
Query SS confidence			.	.																												.	.	.	.	.	.	.
Query Sequence		A	.	.	E	I	E	S	D	R	L	H	C	A	K	R	L	V	Q	R	Y	G	G	V	A	V	L	K	G	A	G	.	.	.	.	.	.	.	T	V	V	A	A	H	P	D	A	L	G	I	I	D	A	G	N	A	G	M	A	S	G	G	M	G	D	V	L	S	G	I	I	G	A	L	L	G	Q	K	L	S	P
Query Conservation			.	.																												.	.	.	.	.	.	.
Alig confidence			.	.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	D	S	T	D	E	E	L	K	E	Y	L	R	L	L	S	D	K	G	P	Q	V	V	I	I	T	S	V	P	V	H	H	K	T	S	V	Y	A	Y	N	R	Q	G	N	R	Y	W	K	V	T	C	P	Y	L	P	A	H	Y	P	G	T	G	D	T	F	T	S	V	I	T	G	S	L	X	Q	G	D	S	L
Template Known Secondary structure			S																T	T	S		S																				T	T	T	T											S				T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.			.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		Y	D	A	A	C	A	G	C	V	A	H	G	A	A	A	D	V	L	A	A	R	F	G	.	.	T	R	G	M	L	A	T	D	L	F	S	T	L	Q	R	I	V	N	P
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		P	X	A	L	D	R	A	T	Q	F	I	L	Q	G	I	R	A	T	F	G	Y	E	Y	D	N	R	E	G	I	L	L	E	K	V	L	H	N	L	D	X	P	I	Q	X
Template Known Secondary structure																					T	S				G	G	G								G	G	G	G	G	S			S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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