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Job DescriptionP31806
Confidence98.71%DateThu Jan 5 11:48:44 GMT 2012
Rank30Aligned Residues177
% Identity14%Templatec3kzhA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable sugar kinase; PDBTitle: crystal structure of a putative sugar kinase from2 clostridium perfringens
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   312.......320.........330.........340.........350.........360.........370 .........380.........390
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Query Sequence  DSLTESLEWADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNR. VITPHPGEAARLLGCSVAEI
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Template Sequence  DSKREIFENAEYTVLDS. . . DNPEIXEYLLKNFKDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHEAEILAGFPITD.
Template Known Secondary structure  TT
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   128.130.........140.... .....150.........160.........170.........180.........190.........200...
 
   391........400.........410.. .......420.........430.........440.........450.........460........
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Query Sequence  ESDRLHCAKRLVQRYGGVAVLK. . GAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVA
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Template Sequence  TDDLIKASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYXNKXPIEDIVKFAXT.
Template Known Secondary structure  T


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   204.....210.........220.........230.........240.........250.........260.........270.........280..
 
   469470.........480. ........490......
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Query Sequence  HGAAADVLAARFG. . TRGMLATDLFSTLQR
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Template Sequence  . . . XSNITISHEETIHPDXALDTVLAKLEK
Template Known Secondary structure  ...TSSSSS
TT
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   283......290.........300.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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