|   |
334 | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | |
|
|
. | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | W | G | K | K | A | L | Q | K | V | E | N | F | R | K | P | M | L | W | D | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | A | L | N | L | L | A | I | N | P | D | K | R | H | N | R | V | I | T | P | H | P | G | E | A | A | R | L | L | G | C | S | V | A | E | I | . |
. |
. |
E | S | D | R | L | H | C | A | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |
|
|   |
|   |   |   |   |   |   | . | . | . |   |   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | A | A | L | I | L | A | Q | K | A | H | A | Y | Q | K | K | V | C | F | D | F | N | Y | R | P | S | L | N | T | A | N | S | A | L | F | X | R | Q | Q | Y | E | R | I | L | P | Y | C | D | I | V | F | G | S | R | R | D | L | V | E | L | L | G | F | I | P | R | E | D | L | E | G | E | A | Q | E | T | E | L | I | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
|
|
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| S |  |  |  |
|
|  |  |  |  |  |  | T | S |
|
|
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |
  |   |
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | V | Q | R | Y | G | G | V | A | V | L | K | G | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | T | V | V | A | A | H | P | D | A | L | G | I | I | D | A | G | N | A | G | M | A | S | G | G | M | G | D | V | L | S | G | I | I | G | A | L | L | G | Q | K | L | S | P | Y | D | A | A | C | A | G | C | V | A | H |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |
|
|
|   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |
| . | . |
Template Sequence |   |
R | F | X | S | Q | Y | N | L | E | W | F | A | G | T | T | R | S | H | S | Q | N | Q | N | Y | L | S | G | Y | L | Y | T | Q | N | E | Y | Q | Q | S | E | K | R | P | L | L | N | L | D | R | I | G | A | G | D | A | Y | A | A | G | I | L | Y | G | Y | S | Q | N | W | S | L | E | K | A | V | T | F | A | T | V | . |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |
|
|
|  |  |
|
|
| S |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
226 | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | |
|
  |
  |   |
470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | |
. | . | . | . | . | 490 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | A | A | D | V | L | A | A | R | F | G | T | R | G | . |
M | L | A | T | D | L | F | S | T | L |
Query Conservation |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
| . |   |   |
|   |
|
|   |   |   |
|
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|
Template Sequence |   |
. |
. |
N | G | V | L | A | H | T | I | Q | G | D | I | P | L | T | T | V | K | Q | V | N | H | V | L |
Template Known Secondary structure |   |
. | . |  |  |  |  |  | T | T | S | S | S | S |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . |
  |