Job Description P31806 Confidence 98.19% Date Thu Jan 5 11:48:44 GMT 2012 Rank 45 Aligned Residues 172 % Identity 15% Template c3in1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized sugar kinase ydjh; PDBTitle: crystal structure of a putative ribokinase in complex with2 adp from e.coli Resolution 2.15 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.					.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.					.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																													.	.	.	.
Query SS confidence															.	.	.	.																													.	.	.	.
Query Sequence		T	E	S	L	E	W	A	D	V	V	V	I	G	.	.	.	.	P	G	L	G	Q	Q	E	W	G	K	K	A	L	Q	K	V	E	N	F	R	K	P	M	L	W	D	A	D	.	.	.	.	A	L	N	L	L	A	I	N	P	D	K	R	H	N	R	V	I	T	P	H	P	G	E	A	A	R	L	L	G	C	S
Query Conservation															.	.	.	.																													.	.	.	.
Alig confidence															.	.	.	.																													.	.	.	.																															.
Template Conservation																																																																																	.
Template Sequence		F	A	R	F	S	Q	A	K	L	L	S	L	A	S	I	F	N	S	P	L	L	D	G	K	A	L	T	E	I	F	T	Q	A	K	A	R	Q	X	I	I	C	A	D	X	I	K	P	R	L	N	E	T	L	D	D	I	C	E	A	L	S	Y	V	D	Y	L	F	P	N	F	A	E	A	K	L	L	T	G	K	.
Template Known Secondary structure		G	G	G	G	G	G		S								T	T	S	T	T	S														T	T	T											S	S	S			G	G	G	G					T	T		S					B											.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.			.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																															.	.																		.
Query SS confidence																															.	.																		.
Query Sequence		V	A	E	I	E	S	D	R	L	H	C	A	K	R	L	V	Q	R	Y	G	G	V	A	V	L	K	G	A	G	.	.	T	V	V	A	A	H	P	D	A	L	G	I	I	D	A	G	N	.	A	G	M	A	S	G	G	M	G	D	V	L	S	G	I	I	G	A	L	L	G	Q	K	L	S	P	Y	D	A	A	C
Query Conservation																															.	.																		.
Alig confidence		.	.	.	.	.																									.	.																		.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	E	T	L	D	E	I	A	D	C	F	L	A	C	G	V	K	T	V	V	I	K	T	G	K	D	G	C	F	I	K	R	G	D	X	T	X	K	V	P	A	V	A	G	I	T	A	I	D	T	I	G	A	G	D	N	F	A	S	G	F	I	A	A	L	L	E	G	K	N	L	R	E	C	A	R
Template Known Secondary structure		.	.	.	.	.		S											T	T		S							G	G	G							T	T									S	S				S			T	T															T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.			.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		A	G	C	V	A	H	G	A	A	A	D	V	L	A	A	R	F	G	T	R	G	.	.	M	L	A	T	D	L	F	S	T	L	Q	R
Query Conservation																							.	.
Alig confidence						.	.	.	.														.	.
Template Conservation						.	.	.	.
Template Sequence		F	A	N	A	.	.	.	.	T	A	A	I	S	V	L	S	V	G	A	T	T	G	V	K	N	R	K	L	V	E	Q	L	L	E	E
Template Known Secondary structure						.	.	.	.							T	S	S	S	S	S	S	S		S	S	S									T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		282	.	.	.					.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions