Job Description P31806 Confidence 99.64% Date Thu Jan 5 11:48:44 GMT 2012 Rank 21 Aligned Residues 242 % Identity 18% Template c3ibqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyridoxal kinase; PDBTitle: crystal structure of pyridoxal kinase from lactobacillus2 plantarum in complex with atp Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.					320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																									.																																										.	.	.	.
Query SS confidence																									.																																										.	.	.	.
Query Sequence		R	L	V	I	I	G	G	D	H	G	T	A	G	A	I	R	M	T	G	E	A	A	L	.	R	A	G	A	G	L	V	R	V	L	T	R	S	E	N	I	A	P	L	L	T	A	R	P	E	L	M	V	H	E	L	T	M	D	S	L	T	E	S	L	E	.	.	.	.	W	A	D	V	V	V	I	G	P	G	L
Query Conservation																									.																																										.	.	.	.
Alig confidence																									.																																										.	.	.	.										.
Template Conservation																																																																																.
Template Sequence		T	X	L	V	A	E	D	L	S	A	V	G	G	I	S	L	S	S	A	L	P	V	L	T	A	X	Q	Y	D	V	A	A	L	P	T	S	L	L	S	T	H	T	S	G	Y	G	T	P	A	V	V	D	L	S	T	W	L	P	Q	V	F	A	H	W	T	R	A	Q	L	H	F	D	Q	A	L	I	G	Y	.	V
Template Known Secondary structure													S	S													T	T															S	S	S	S	S	S							T	T												T	T				S							.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.													.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																		.									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	Q	E	W	G	K	K	A	L	Q	K	V	E	N	F	.	R	K	P	M	L	W	D	A	.	.	.	.	.	.	.	.	.	.	.	.	D	A	L	N	L	L	A	I	N	P	D	K	R	H	N	R	V	I	T	P	H	P	G	E	A	A	R	L	L	G	C	S	V	A	E	I	E	S	D	R	L	H	C
Query Conservation																		.									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.									.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation																																																																											.
Template Sequence		G	S	V	A	L	C	Q	Q	I	T	T	Y	L	E	Q	Q	T	L	S	L	L	V	V	D	P	V	L	G	D	L	G	Q	L	Y	Q	G	F	D	Q	D	Y	V	A	A	X	R	Q	L	I	Q	Q	A	D	V	I	L	P	N	T	T	E	A	A	L	L	T	G	A	P	Y	Q	V	T	.	P	D	L	E	V	I
Template Known Secondary structure																	S			S											T	T				T	T														T	T		S														T					S	S	.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160
		398	.	400	.	.	.	.	.			.	.	.	.	410	.	.	.	.							.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.										.	.	.	.	.	.
Query SS confidence										.	.										.	.	.	.	.	.
Query Sequence		A	K	R	L	V	Q	R	Y	.	.	G	G	V	A	V	L	K	G	A	.	.	.	.	.	.	G	T	V	V	A	A	H	P	D	A	L	G	I	I	D	A	G	N	A	G	M	A	S	G	G	M	G	D	V	L	S	G	I	I	G	A	L	L	G	Q	K	L	S	P	Y	D	A	A	C	A	G	C	V	A	H
Query Conservation										.	.										.	.	.	.	.	.
Alig confidence										.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	A	L	Q	A	Q	L	K	T	G	A	H	A	V	I	T	D	V	Q	R	A	D	Q	I	G	C	A	W	L	D	E	A	G	H	V	Q	Y	C	G	A	R	R	L	P	G	H	Y	N	G	T	G	D	T	L	A	A	V	I	A	G	L	L	G	R	G	Y	P	L	A	P	T	L	A	R	A	N	Q	W	L
Template Known Secondary structure							T	T	S		T	T											T	T									T	T	S											S	S			S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	A	D	V	L	A	A	R	F	G	T	R	G	M	L	A	T	D	L	F	S	T	L	Q	R	I	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	X	A	V	A	E	T	I	A	Q	N	R	T	D	D	R	Q	G	V	A	L	G	D	L	L	Q	A	I	L	A
Template Known Secondary structure											T			S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions