Job Description P31806 Confidence 86.55% Date Thu Jan 5 11:48:44 GMT 2012 Rank 85 Aligned Residues 67 % Identity 16% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	A	R	H	W	L	V	L	C	G	H	G	N	N	G	G	D	G	Y	V	V	A	R	L	A	K	A	V	G	I	E	V	T	L	L	A	Q	E	S	D	K	P	L	P	E	E	A	A	L	A	R	E	A	W	L	N	A	G	G	E	I	H	A	S	N	I	V	W	P	E	S	V	D	L	I	V	D	A	L
Query Conservation
Alig confidence											.								.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation											.								.	.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		P	T	D	K	K	I	G	F	L	.	G	L	G	L	M	G	S	.	.	.	G	I	V	S	N	L	L	K	M	G	H	T	V	T	V	W	N	R	T	A	E	K	.	.	.	.	.	.	.	.	.	C	D	L	F	I	Q	E	G	A	R	L	G	R	T	P	A	E	V	V	S	T	C	D	I	T	F	A	C	V
Template Known Secondary structure				S	S						.			S					.	.	.									T	T								S	S	G	G	G	.	.	.	.	.	.	.	.	.	G						T	T					S										S
Template Predicted Secondary structure											.								.	.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.										.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions