Return to main results Retrieve Phyre Job Id

Job DescriptionP31806
Confidence98.48%DateThu Jan 5 11:48:44 GMT 2012
Rank32Aligned Residues175
% Identity20%Templatec2rbcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sugar kinase; PDBTitle: crystal structure of a putative ribokinase from agrobacterium2 tumefaciens
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   315....320.........330.........340.........350.........360.........370.........380.........390....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  TESLEWADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESDR
Query Conservation          

 





                 








  
          




 

  

 
        
 
Alig confidence 
















..




















































......

Template Conservation                   ..                
  
                
    
  
        ......  
Template Sequence  PEDIALFDAVLVDVRWP. . ELALDVLTVARALGKPAILDGDVAPVETLEGLAPAATHIVFSEPAATRLTGLE. . . . . . TV
Template Known Secondary structure  TT
S
SSS..TT


S

GGG
S

S......S
Template Predicted Secondary structure 







..



















......
Template SS confidence 















































































   130.........140...... ...150.........160.........170.........180.........190......... 200.
 
   395....400....... ..410.........420... ......430.........440.........450.........460.........
Predicted Secondary structure 

..





...














Query SS confidence 












. .















. . .













































Query Sequence  LHCAKRLVQRYGG. . VAVLKGAGTVVAAHPD. . . ALGIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAH
Query Conservation     
   
     .. 




  
 
     ... 
 
   
   


 











 



    


  
  

Alig confidence 












..















...











































..
Template Conservation                 



 
  
                    










 

    
  
     

  
  ..
Template Sequence  KDXLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTXQVEAVDTLAAGDIFHGTFALAXAEGXQSRAAVRLSSV. .
Template Known Secondary structure  STTS
GGG

TT









S

TTTT

..
Template Predicted Secondary structure 





























..
Template SS confidence 















































































   202.......210.........220.........230.........240.........250.........260.........270.........
 
   470.........480....... ..490.........500.
Predicted Secondary structure 





..
Query SS confidence 

















. .













Query Sequence  GAAADVLAARFGTRGMLA. . TDLFSTLQRIVNPE
Query Conservation 
 

  

      
  
.. 

   

      
Alig confidence  ..















..













Template Conservation  .. 

  
   
     
    
           
Template Sequence  . . AAALKCTVFGGRIGAPTREETEEAXRQWLERE
Template Known Secondary structure  ..TSSSGGGG


T

Template Predicted Secondary structure  ..










Template SS confidence 

































   280.........290.........300.........310.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions