Job Description P31806 Confidence 69.37% Date Thu Jan 5 11:48:44 GMT 2012 Rank 265 Aligned Residues 143 % Identity 11% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																			.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Query Sequence		A	D	D	I	R	R	G	E	R	E	A	A	D	V	L	G	L	T	L	Y	E	L	M	L	R	A	G	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	Q	V	C	R	S	A	Y	P	.	.	.	.	.	.	.	.	D	A	R	H	W	L	V	L	C	G	H	G	N	N	G
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Alig confidence																.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		P	E	P	L	R	K	A	E	K	L	L	Q	E	T	.	G	I	K	E	S	T	K	T	N	T	L	K	K	L	L	R	F	S	V	E	A	G	G	L	T	E	E	N	V	V	G	K	L	Q	E	I	L	C	D	M	L	P	S	A	D	K	W	Q	E	P	I	H	S	K	Y	I	V	L	F	G	S	T	G	A	G
Template Known Secondary structure															S	.	S														T					S	S	S				S	S	S												T	S			S	T	T	S				S		S	S	B							S	S	S
Template Predicted Secondary structure																.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		74	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.
Predicted Secondary structure				.	.	.																																																	.	.	.	.	.	.	.	.																	.
Query SS confidence				.	.	.																																																	.	.	.	.	.	.	.	.																	.
Query Sequence		G	D	.	.	.	G	Y	V	V	A	R	L	A	K	A	V	G	I	E	V	T	L	L	A	Q	E	S	D	K	P	L	P	E	E	A	A	L	A	R	E	A	W	L	N	A	G	G	E	I	H	A	S	N	.	.	.	.	.	.	.	.	I	V	W	P	E	S	V	D	L	I	V	D	A	L	L	G	.	T	G
Query Conservation				.	.	.																																																	.	.	.	.	.	.	.	.																	.
Alig confidence				.	.	.																									.	.																							.	.	.	.	.	.	.	.																	.
Template Conservation																															.	.
Template Sequence		K	T	T	T	L	A	K	L	A	A	I	S	M	L	E	K	H	K	K	I	A	F	I	T	T	D	T	Y	R	.	.	I	A	A	V	E	Q	L	K	T	Y	A	E	L	L	Q	A	P	L	E	V	C	Y	T	K	E	E	F	Q	Q	A	K	E	L	F	S	E	Y	D	H	V	F	V	D	T	A	G	R	N	F
Template Known Secondary structure																T	S												S	S	.	.	T	T	T	T					T					T	T							S	S										T	T	T	T	S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	A	P	R	E	S	I	S	Q	L	I	D	H	A	N	S	H	P	A	P	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	P	Q	Y	I	D	E	L	K	E	T	I	P	F	E	S	S	I	Q	S	F	L	V
Template Known Secondary structure		S	S	G	G	G	T							S				T	T	B
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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