Job Description P31806 Confidence 100.00% Date Thu Jan 5 11:48:44 GMT 2012 Rank 1 Aligned Residues 473 % Identity 30% Template c2ax3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:hypothetical protein tm0922; PDBTitle: crystal structure of a putative carbohydrate kinase (tm0922) from2 thermotoga maritima msb8 at 2.25 a resolution Resolution 2.27 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		D	I	R	R	G	E	R	E	A	A	D	V	L	G	L	T	L	Y	E	L	M	L	R	A	G	E	A	A	F	Q	V	C	R	S	A	Y	P	D	A	.	.	R	H	W	L	V	L	C	G	H	G	N	N	G	G	D	G	Y	V	V	A	R	L	A	K	A	V	G	I	E	V	T	L	L	A	Q	E	S	D	K
Query Conservation																																									.	.
Alig confidence																																									.	.																																						.	.
Template Conservation																																																																																.	.
Template Sequence		H	X	K	E	I	D	E	L	T	I	K	E	Y	G	V	D	S	R	I	L	X	E	R	A	G	I	S	V	V	L	A	X	E	E	E	L	G	N	L	S	D	Y	R	F	L	V	L	C	G	G	G	N	N	G	G	D	G	F	V	V	A	R	N	L	L	G	V	V	K	D	V	L	V	V	F	L	G	K	.	.
Template Known Secondary structure													T	T																								S			T	T									S	S														T	T	T	S	S									S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		P	L	P	E	E	A	A	L	A	R	E	A	W	L	N	A	G	G	E	I	H	A	S	N	I	.	V	W	P	E	S	V	D	L	I	V	D	A	L	L	G	T	G	L	R	Q	A	P	R	E	S	I	S	Q	L	I	D	H	A	N	S	H	P	A	P	I	V	A	V	D	I	P	S	G	L	L	A	E	T	G
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		K	K	T	P	D	C	E	Y	N	Y	G	L	Y	K	K	F	G	G	K	V	V	E	Q	F	E	P	S	I	L	N	E	F	D	V	V	V	D	A	I	F	G	T	G	L	R	G	E	I	T	G	E	Y	A	E	I	I	N	L	V	N	K	S	G	K	V	V	V	S	V	D	V	P	S	G	I	D	S	N	T	G
Template Known Secondary structure		S															T	T					S				G	G	G	G	G	G		S						S			T	T			S																S								S	S		T	T	B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	G	A	V	I	N	A	D	H	T	I	T	F	I	A	L	K	P	G	L	L	T	G	K	A	R	D	V	T	G	Q	L	H	F	D	S	L	G	L	D	S	W	L	A	G	Q	E	T	K	I	Q	R	F	S	A	E	Q	L	S	H	W	L	K	P	R	R	P	T	S	H	K	G	D	H	G	R	L	V
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		K	V	L	R	T	A	V	K	A	D	L	T	V	T	F	G	V	P	K	I	G	H	I	L	F	P	G	R	D	L	T	G	K	L	K	V	A	N	I	G	H	P	V	H	L	I	N	S	.	I	N	R	Y	V	I	T	R	E	X	V	R	S	L	L	P	E	R	P	R	D	S	H	K	G	T	Y	G	K	V	L
Template Known Secondary structure			B	S	S						S						S	S							S	T	T														S							T	T	.															S					S	S			G	G	G	G
Template Predicted Secondary structure																																																		.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310											.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	G	G	D	H	G	T	A	G	A	I	R	M	T	G	E	A	A	L	R	A	G	A	G	L	V	R	V	L	T	R	S	E	N	I	A	P	L	L	T	A	R	P	E	L	M	V	H	E	L	T	.	.	.	.	.	.	.	.	.	.	M	D	S	L	T	E	S	L	E	W	A	D	V	V	V	I	G	P
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	A	G	S	R	L	Y	S	G	A	P	V	L	S	G	X	G	S	L	K	V	G	T	G	L	V	K	L	A	V	P	F	P	Q	N	L	I	A	T	S	R	F	P	E	L	I	S	V	P	I	D	T	E	K	G	F	F	S	L	Q	N	L	Q	E	C	L	E	L	S	K	D	V	D	V	V	A	I	G	P
Template Known Secondary structure							S	S			S												T	T		S								T	T	T	T								T	T	S								S	S	S	S			G	G	G										T		S						T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																				.																	.	.
Query SS confidence																				.																	.	.
Query Sequence		G	L	G	Q	Q	E	W	G	K	K	A	L	Q	K	V	E	N	F	.	R	K	P	M	L	W	D	A	D	A	L	N	L	L	A	I	.	.	N	P	D	K	R	H	N	R	V	I	T	P	H	P	G	E	A	A	R	L	L	G	C	S	V	A	E	I	E	S	D	R	L	H	C	A	K	R	L	V	Q	R	Y
Query Conservation																				.																	.	.
Alig confidence																				.																	.	.																														.
Template Conservation																																																																				.
Template Sequence		G	L	G	N	N	E	H	V	R	E	F	V	N	E	F	L	K	T	L	E	K	P	A	V	I	D	A	D	A	I	N	V	L	D	T	S	V	L	K	E	R	K	S	P	A	V	L	T	P	H	P	G	E	X	A	R	L	V	K	K	T	V	G	D	V	K	.	Y	N	Y	E	L	A	E	E	F	A	K	E	N
Template Known Secondary structure		T				S																S											T								T		S	S																T							T	.	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	V	A	V	L	K	G	A	G	T	V	V	A	A	H	P	D	A	L	G	I	I	D	A	G	N	A	G	M	A	S	G	G	M	G	D	V	L	S	G	I	I	G	A	L	L	G	Q	K	L	S	P	Y	D	A	A	C	A	G	C	V	A	H	G	A	A	A	D	V	L	A	A	R	F	G	T	R	G	M
Query Conservation
Alig confidence																				.																																																							.	.
Template Conservation																				.																																																							.	.
Template Sequence		D	C	V	L	V	L	K	S	A	T	T	I	V	T	D	G	E	K	.	T	L	F	N	I	T	G	N	T	G	L	S	K	G	G	S	G	D	V	L	T	G	X	I	A	G	F	I	A	Q	G	L	S	P	L	E	A	S	T	V	S	V	Y	L	H	G	F	A	A	E	L	F	E	Q	.	.	D	E	R	G	L
Template Known Secondary structure		T	S						S	S	S						S	S		.									G	G	G	S	S	T	T															T	T																				T		S	S	.	.		G	G	G
Template Predicted Secondary structure																				.																																																							.	.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.			.	.	470	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	D	L	F	S	T	L	Q	R	I	V	N	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	S	E	L	L	R	L	I	P	E	A	I	R	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.