 |
Job Description | P31806 | Confidence | 85.16% | Date | Thu Jan 5 11:48:44 GMT 2012 |
Rank | 101 | Aligned Residues | 98 |
% Identity | 15% | Template | c1k97A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:argininosuccinate synthase; |
PDBTitle: crystal structure of e. coli argininosuccinate synthetase in complex2 with aspartate and citrulline
|
Resolution | 2.00 Å |
|
 |
  |   |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | R | S | A | Y | P | D | A | R | H | W | L | V | L | C | G | H | G | N | N | G | G | D | G | Y | V | V | A | R | L | A | K | A | V | G | I | E | V | T | L | L | A | Q | E | S | D | K | P | L | P | E | E | A | A | L | A | R | E | A | W | L | N | A | G | G | E | I | H | A | S | N | I | V | W | P | E | S | V | D | L |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|   | . | . | . |
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |
|
|   |
|
|   |
|
|   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |
Template Sequence |   |
I | L | K | H | L | P | V | G | Q | R | I | G | I | A | F | . |
. |
. |
S | G | G | L | D | T | S | A | A | L | L | W | M | R | Q | K | G | A | V | P | Y | A | Y | T | A | N | L | G | Q | P | D | E | E | D | Y | D | A | I | P | R | R | A | M | E | Y | G | A | E | N | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R |
Template Known Secondary structure |   |
B |
| S | S |
|
| T | T | S |  |  |  |  |  |
| . | . | . |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |
|
|
| T | T |
| S |
| T | T |  |  |  |  |  |  |  |  | T | T |
| S |  |  | . | . | . | . | . | . | . | . | . | . | . |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
|
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. |
  |
  |   |
133 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | L | L | G | T | G | L | R | Q | A | P | R | E | S | I | S | Q | L | I | D | H | A | N | S | H | P | A | P | I | V | A |
Query Conservation |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|   |   |   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|   |
|   | . | . |   |   |   |
|
|
|   |
|   |   |   |
|
|   |   |
|
|
Template Sequence |   |
L | I | D | C | R | K | Q | L | V | A | E | G | I | A | A | I | Q | C | G | A | F | H | N | T | T | G | G | L | T | Y | F | N | T | T | P | L | G | R | A | V | T | . |
. |
G | T | M | L | V | A | A | M | K | E | D | G | V | N | I | W | G |
Template Known Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|  |  | T | T |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
|
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|