|   |
3 | . | . | . | . | . | . | 10 | . | . | . | |
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
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|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
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|
|
|
|
|  |  |  |  |
Query SS confidence |   |
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|
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|
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|
|
| . |
|
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| . |
. |
. |
. |
. |
. |
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|
| . |
. |
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|
Query Sequence |   |
I | L | K | V | I | G | L | L | M | E | Y | . |
P | D | E | L | L | W | E | C | K | E | D | A | L | A | L | I | . |
. |
. |
. |
. |
. |
R | R | D | A | P | M | L | T | D | F | T | H | N | L | L | N | A | P | L | L | D | K | Q | A | E | W | C | E | V | F | . |
. |
D | R | G | R | T | T | S | L | L | L | F | E | H | V |
Query Conservation |   |
  |   |   |   |
|
|   |
|
|   |
| . |
|   |
|   |
|   |   |   |
|   |
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
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|
|   |   |
|
|   |   |
| . | . |
|   |   |   |   |   |
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|   |   |   |
Alig confidence |   |
|
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|
| . |
|
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| . | . | . | . | . | . |
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|
| . | . |
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|
Template Conservation |   |
  |   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
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|   |
|   |   |   |   |   |   |
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|   |
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|
Template Sequence |   |
T | A | R | V | L | G | A | L | F | Y | Y | S | P | E | S | H | E | T | A | P | L | V | Q | A | L | L | N | D | D | W | Q | A | Q | W | P | L | D | A | E | A | L | A | P | V | A | A | X | F | K | T | H | S | E | E | S | L | P | Q | A | W | Q | R | L | F | I | G | P | Y | A | L | P | S | P | P | W | G | S | V | W | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | S |
| T | T | S | T | T | T |  |  |  |  |  |  |  |  |  | S |
|
| G | G | G | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| S | S |
|  |  |  |  |  |  |  |  |  | T |
| S | S |
|
| S | S |
|
| B |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
Template SS confidence |   |
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  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
Predicted Secondary structure |   |
 |
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
Query SS confidence |   |
|
|
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|
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|
| . |
. |
. |
. |
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|
| . |
|
|
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|
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|
|
| . |
. |
Query Sequence |   |
H | A | E | S | R | D | R | G | Q | A | M | V | D | L | L | A | E | Y | E | K | V | G | L | Q | L | D | C | R | E | L | P | D | Y | L | P | L | Y | L | E | Y | L | S | V | L | . |
. |
. |
. |
P | D | D | Q | A | K | E | G | L | L | N | V | . |
A | P | I | L | A | L | L | G | G | R | L | K | Q | R | E | A | P | . |
. |
Query Conservation |   |
  |
|
|   |
|   |
|
|   |
|
|
|   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |
|
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|
|   |   |
|
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|
|   |
| . | . | . | . |   |   |   |
|
|   |   |   |
|   |   |   | . |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| . | . | . | . |
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|
| . | . | . | . |
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|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   | . | . | . | . |   |
|
|   |
|
|
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
Template Sequence |   |
D | R | E | S | V | L | F | G | D | S | T | L | A | L | R | Q | W | X | R | E | N | G | I | . |
. |
. |
. |
Q | E | P | E | D | H | F | G | S | L | L | L | L | A | A | W | L | A | E | N | D | R | H | H | E | C | E | Q | L | L | A | W | H | L | F | P | W | S | S | R | F | L | D | V | F | I | D | H | A | G | H | P | F |
Template Known Secondary structure |   |
S | T | T |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . |
|
|
| T | T | B |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
147 | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
W | Y | A | L | F | D | A | L |
Query Conservation |   |
|
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|
Template Sequence |   |
Y | Q | A | L | G | Q | L | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . |
  |