Return to main results Retrieve Phyre Job Id

Job DescriptionP06999
Confidence98.88%DateThu Jan 5 10:59:52 GMT 2012
Rank56Aligned Residues199
% Identity13%Templated2ax3a1
SCOP infoRibokinase-like Ribokinase-like YjeF C-terminal domain-like
Resolution2.27

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140.........150.........160.........170........ .180.
Predicted Secondary structure 































...


Query SS confidence 









































































. . .


Query Sequence  RFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAI. . . GNI
Query Conservation                               
                            
               ...   
Alig confidence 





































..

































...


Template Conservation                              
 


 


 ..       
         
 



 

       
      
Template Sequence  ISVPIDTEKGFFSLQNLQECLELSKDVDVVAIGPGLGN. . NEHVREFVNEFLKTLEKPAVIDADAINVLDTSVLKERKSP
Template Known Secondary structure 

SSSS

GGGT
S
TT


..S

S

T

T
SS
Template Predicted Secondary structure 

















..











Template SS confidence 















































































   283......290.........300.........310.........320 .........330.........340.........350.........360
 
   182.......190.........200.........210.........220.........230.........240.........250.........260.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  ELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGA
Query Conservation 


  
  
   
                 
         
                         










 

Alig confidence 








































....


































Template Conservation   




  
  

              
          


....

    
           
   
   



 


 
Template Sequence  AVLTPHPGEXARLVKKTVGDVKYNYELAEEFAKENDCVLVL. . . . KSATTIVTDGEKTLFNITGNTGLSKGGSGDVLTGX
Template Known Secondary structure 


T

TT
TS....
SSS
SS




GGGSSTT
Template Predicted Secondary structure 










....



















Template SS confidence 















































































   361........370.........380.........390.........400. ........410.........420.........430......
 
   262.......270......... 280.........290.........300.........
Predicted Secondary structure 



...










Query SS confidence 

















. . .





























Query Sequence  MTLKLAENASLEEMVRFG. . . VAAGSAATLNQGTRLCSHDDTQKIYAYLSR
Query Conservation   
  
  
     

  
...   

      
   
   

         
Alig confidence 

















...





























Template Conservation 


 

 
    

   
  

  
   
     
  
 

   
      
Template Sequence  IAGFIAQGLSPLEASTVSVYLHGFAAELFEQDERGLTASELLRLIPEAIRR
Template Known Secondary structure  TT

T
SS
GGG

Template Predicted Secondary structure 









Template SS confidence 


















































   437..440.........450.........460.........470.........480.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions