Job Description P06999 Confidence 99.70% Date Thu Jan 5 10:59:52 GMT 2012 Rank 46 Aligned Residues 224 % Identity 24% Template d1ub0a_ SCOP info Ribokinase-like Ribokinase-like Thiamin biosynthesis kinases Resolution 2.05

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		M	V	R	I	Y	T	L	T	L	A	P	S	L	D	S	A	T	I	T	P	Q	I	Y	P	E	G	K	L	R	C	T	A	P	V	F	E	P	G	G	G	G	I	N	V	A	R	.	A	I	A	H	L	G	G	S	A	T	A	I	F	P	A	G	G	A	T	G	E	H	L	V	S	L	L	A	D	E	N	V	P
Query Conservation																																																.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	V	A	L	T	I	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	G	G	G	A	G	V	Q	A	D	L	K	V	F	F	R	F	G	V	Y	G	T	S	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S	S												T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10																									.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	V	E	A	K	D	W	T	R	Q	N	L	H	V	H	V	E	A	S	G	E	Q	Y	R	F	V	M	P	G	A	A	L	N	E	D	E	F	R	Q	L	E	E	Q	V	L	E	I	E	S	G	A	I	L	V	I	S	G	S	L	P	P	G	V	K	L	E	K	L	T	Q	L	I	S	A	A	Q	K	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																										.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																										.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	V	T	A	Q	N	T	L	G	V	Q	R	V	H	L	L	P	P	.	.	.	E	V	V	Y	A	Q	I	E	S	V	A	Q	D	F	P	L	H	A	A	K	T	G	A	L	G	.	.	.	.	.	D	A	A	I	V	E	A	V	A	E	A	V	R	R	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.								T	T											.	.	.														S			S									.	.	.	.	.	S														T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																										.	.	.	.	.
Template SS confidence
															37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.
Predicted Secondary structure																	.	.	.	.	.																																																									.
Query SS confidence																	.	.	.	.	.																																																									.
Query Sequence		G	I	R	C	I	V	D	S	S	G	E	A	L	S	A	.	.	.	.	.	A	L	A	I	G	N	I	E	L	V	K	P	N	Q	K	E	L	S	A	L	V	N	R	E	L	T	Q	P	D	D	V	R	K	A	A	Q	E	I	V	N	S	G	K	A	K	R	V	V	V	S	L	G	P	Q	G	A	.	L	G	V
Query Conservation																	.	.	.	.	.																																																									.
Alig confidence																	.	.	.	.	.																																																									.
Template Conservation
Template Sequence		G	V	R	P	L	V	V	D	P	V	M	A	K	E	A	A	A	A	L	K	E	R	L	F	P	L	A	D	L	V	T	P	N	R	L	E	A	E	A	L	L	G	R	P	I	R	T	L	K	E	A	E	E	A	A	K	A	L	L	A	L	G	P	K	A	V	L	L	K	G	G	H	L	E	A	V	D	L	L	A
Template Known Secondary structure		T			S																			T	G	G	G		S					B										S				S													T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	E	N	C	I	Q	V	V	P	P	P	V	K	S	Q	S	T	V	G	A	G	D	S	M	V	G	A	M	T	L	K	L	A	E	N	A	S	L	E	E	M	V	R	F	G	V	A	A	G	S	A	A	T	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	G	G	V	L	R	F	S	A	P	R	V	H	T	R	N	T	H	G	T	G	C	T	L	S	A	A	I	A	A	L	L	A	K	G	R	P	L	A	E	A	V	A	E	A	K	A	Y	L	T	R	A	L	K	T
Template Known Secondary structure			T	T													S			T	T															T	T																				T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions