Job Description P06999 Confidence 25.59% Date Thu Jan 5 10:59:52 GMT 2012 Rank 154 Aligned Residues 157 % Identity 12% Template d1rq2a1 SCOP info Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain Resolution 1.86

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	G	G	G	I	N	V	A	R	A	I	A	H	L	G	G	S	A	T	A	I	F	P	A	G	G	A	T	G	E	H	L	V	S	L	L	A	D	E	N	V	P	V	A	T	V	E	A	K	D	W	T	R	Q	N	L	H	V	H	V	E	A	S	G	E	Q	Y	R	F	V	M	P	G	A	A	L	N	E	D
Query Conservation
Alig confidence																														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	G	G	G	V	N	A	V	N	R	M	I	E	Q	G	L	K	G	V	E	F	I	A	I	N	T	D	.	.	.	.	.	A	Q	A	L	L	M	S	D	A	D	V	K	L	D	V	G	R	D	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	P	E	V	G	R	K	A
Template Known Secondary structure																T	T			S								S		.	.	.	.	.										S							T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																		.	.	.	.	.	.	70	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.													.	.	.	180	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	R	Q	L	E	E	Q	V	L	E	I	E	S	G	A	I	L	V	I	S	G	S	L	P	P	G	V	K	L	E	K	L	T	Q	L	I	S	A	A	Q	K	Q	G	I	R	C	I	V	D	S	S	G	E	A	L	S	A	A	L	.	.	.	.	.	.	.	.	.	.	.	.	A	I	G	N	I	E	L	V
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	D	A	K	D	E	I	E	E	L	L	R	G	A	D	M	V	F	V	T	A	G	E	G	G	G	T	G	T	G	G	A	P	V	V	A	S	I	A	R	K	L	G	A	L	T	V	G	V	V	T	R	P	F	S	F	E	G	K	R	R	S	N	Q	A	E	N	G	I	A	A	L	R	E	S	C	D	T	L
Template Known Secondary structure					T									T	T		S								T	T	S	S																	T												G	G	G																				S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	N	Q	K	E	L	S	A	L	V	N	R	E	L	T	Q	P	D	D	V	R	K	A	A	Q	E	I	V	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	I	P	N	D	R	L	L	Q	M	G	D	A	A	V	S	L	M	D	A	F	R	S	A	D	E	V	L	L	N
Template Known Secondary structure										T	T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions