Job Description P06999 Confidence 98.47% Date Thu Jan 5 10:59:52 GMT 2012 Rank 64 Aligned Residues 235 % Identity 15% Template c3drwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:adp-specific phosphofructokinase; PDBTitle: crystal structure of a phosphofructokinase from pyrococcus2 horikoshii ot3 with amp Resolution 1.90 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.																					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	E	P	G	G	G	G	I	N	V	A	R	A	I	A	H	L	G	G	S	.	.	A	T	A	I	F	P	A	G	G	A	T	G	E	H	L	V	S	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	N	V	P	V	A	T	V	E	A	K	D	W	T	R	Q
Query Conservation																							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	R	L	G	G	Q	A	G	I	I	A	N	T	L	A	G	L	K	I	R	K	V	I	A	Y	T	P	F	L	P	K	R	L	A	E	L	F	K	K	G	V	L	Y	P	V	V	E	N	G	E	L	Q	F	K	P	I	Q	E	A	Y	R	E	G	D	P	L	K	I	N	R	I	F	E	F	R	K	G	L	K
Template Known Secondary structure							S												T	T		S							S								T	T	S		T	T							S	S	S	S						G	G	G				T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		92	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.											.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																					.																		.														.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.																					.																		.														.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	.	.	.	H	V	H	V	E	A	S	G	E	Q	Y	R	F	V	M	P	G	A	A	L	.	N	E	D	E	F	R	Q	L	E	E	Q	V	L	E	I	E	S	.	G	A	I	L	V	I	S	G	S	L	P	P	G	.	.	.	.	.	.	.	.	.	.	V	K	L	E	K	L	T	Q	L	I	S	A	A
Query Conservation				.	.	.																					.																		.														.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.																					.																		.														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	L	G	D	E	T	I	E	I	P	N	S	G	R	F	I	V	S	A	R	F	E	S	I	S	R	I	E	T	R	E	D	I	K	P	F	L	G	E	I	G	K	E	V	D	G	A	I	F	S	G	Y	Q	G	L	R	T	K	Y	S	D	G	K	D	A	N	Y	Y	L	R	R	A	K	E	D	I	I	E	F
Template Known Secondary structure				S	S	S							S											S	G	G	G			S			T	T	T	G	G	G									S							G	G	G			S	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.												.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	Q	G	I	R	C	I	V	D	S	S	G	E	A	L	S	A	A	L	.	.	.	.	.	.	A	I	G	N	I	E	L	V	K	P	N	Q	K	E	L	S	A	L	V	.	.	.	.	.	.	.	.	.	.	.	N	R	E	L	T	Q	P	D	D	V	R	K	A	A	Q	E	I	V	N	S	G	K	A	K
Query Conservation																						.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	K	D	V	K	I	H	V	E	F	A	S	V	Q	D	R	K	L	R	K	K	I	I	T	N	I	L	P	F	V	D	S	V	G	I	D	E	A	E	I	A	Q	I	L	S	V	L	G	Y	R	E	L	A	D	R	I	F	T	Y	N	R	L	E	D	S	I	L	G	G	M	I	I	L	D	E	L	N	F	E
Template Known Secondary structure				T	T											S												T	G	G	G	S	S																	T																															S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	V	V	S	L	G	P	Q	G	A	L	G	V	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	Q	V	H	T	T	Y	Y	L	M	Y	I	T	H	R	D	N	P	L	S	E	E	E	L	A	K	S	L	E	F	G	T	T	L	A	A	A	R	A	S	L	G	D	I	R	G	P	D	D	Y	K	V	G	L	K	V	P	F	N	E	R	S	E	Y	V	K	L	R	F	E	E	A	K	S	R	L	R	M	R
Template Known Secondary structure								S	S								T	T		S	S																							S	S			S	G	G	G						T	S				T	T															S			T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
			236	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure		.												.
Query SS confidence		.												.
Query Sequence		.	E	N	C	I	Q	V	V	P	P	P	V	.	K	S	Q	S	T	V	G	A	G	D	S	M	V	G	A	M	T	L	K	L	A	E
Query Conservation		.												.
Alig confidence		.												.
Template Conservation
Template Sequence		E	Y	K	V	V	V	I	P	T	R	L	V	Q	N	P	V	L	T	V	G	L	G	D	T	I	S	A	G	A	F	L	T	Y	L	E
Template Known Secondary structure		T												S	S		S			T	T
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions