Job Description P06999 Confidence 100.00% Date Thu Jan 5 10:59:52 GMT 2012 Rank 27 Aligned Residues 298 % Identity 16% Template c2qcvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative 5-dehydro-2-deoxygluconokinase; PDBTitle: crystal structure of a putative 5-dehydro-2-deoxygluconokinase (iolc)2 from bacillus halodurans c-125 at 1.90 a resolution Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		R	I	Y	T	L	T	L	A	P	S	L	D	S	A	T	I	T	P	Q	I	Y	P	E	G	K	L	R	C	T	A	P	V	F	E	P	G	G	G	G	I	N	V	A	R	A	I	A	H	L	G	G	S	A	T	A	I	F	P	A	G	G	A	.	T	G	E	H	L	V	S	L	L	A	D	E	N	V	P	V	A
Query Conservation																																																																.
Alig confidence								.																		.	.	.																																				.
Template Conservation								.																		.	.	.
Template Sequence		D	L	I	A	I	G	.	R	A	C	I	D	L	N	A	V	E	Y	N	R	P	X	E	E	.	.	.	T	X	T	F	S	K	Y	V	G	G	S	P	A	N	I	V	I	G	S	S	K	L	G	L	K	A	G	F	I	G	K	I	A	D	D	Q	H	G	R	F	I	E	S	Y	X	R	G	V	G	V	D	T	S
Template Known Secondary structure							S	.									S	S		S	S		G	G	G	.	.	.										S												T	T											S	S													T	T		B		T
Template Predicted Secondary structure								.																		.	.	.
Template SS confidence
		12	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																																																		.
Query SS confidence										.																																																		.
Query Sequence		T	V	E	A	K	D	W	T	.	R	Q	N	L	H	V	H	V	E	A	S	G	E	Q	Y	R	F	V	M	P	G	A	A	L	N	E	D	E	F	R	Q	L	E	E	Q	V	L	E	I	E	S	G	A	I	L	V	I	S	G	.	S	L	P	P	G	V	K	L	E	K	L	T	Q	L	I	S	A	A	Q	K	Q
Query Conservation										.																																																		.
Alig confidence										.																																																		.
Template Conservation
Template Sequence		N	L	V	V	D	Q	E	G	H	K	T	G	L	A	F	T	E	I	K	S	P	E	E	C	S	I	L	X	Y	R	Q	D	V	A	D	L	Y	L	S	P	E	E	V	N	E	A	Y	I	R	R	S	K	L	L	L	V	S	G	T	A	L	S	K	S	P	S	R	E	A	V	L	K	A	I	R	L	A	K	R	N
Template Known Secondary structure		T					S	S														T	T									T	T		G	G	G	G			G	G	G							T	T								G	G	G	G	S	S	T	T															T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.											.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	R	C	I	V	D	S	S	G	E	A	L	S	A	A	L	.	.	.	.	.	.	.	.	.	.	A	I	G	N	I	E	L	V	K	P	N	Q	K	E	L	S	A	L	V	N	R	E	L	T	Q	P	D	D	V	R	K	A	A	Q	E	I	V	N	S	G	K	A	K	R	V	V	V	S	L	G	P	Q	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																																																			.	.
Template Sequence		D	V	K	V	V	F	E	L	D	Y	R	P	Y	S	W	E	T	P	E	E	T	A	V	Y	Y	S	L	V	A	E	Q	S	D	I	V	I	G	T	R	E	E	F	D	V	L	E	N	R	T	.	.	E	K	G	D	N	D	E	T	I	R	Y	L	F	K	H	S	P	E	L	I	V	I	K	H	G	V	E	G	S
Template Known Secondary structure		T											G	G	G	S	S																	S													T	T		S	.	.	S												T	T	S	S		S							G	G	G
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	V	D	S	E	N	C	I	Q	V	V	P	P	P	V	K	S	Q	S	T	V	G	A	G	D	S	M	V	G	A	M	T	L	K	L	A	E	N	A	S	L	E	E	M	V	R	F	G	V	A	A	G	S	A	A	T	L	N	Q	G	T	R	L	C	S	H	D	D	T	Q	K	I	Y	A	Y	L	S	R
Query Conservation
Alig confidence																																																														.	.	.
Template Conservation																																																														.	.	.
Template Sequence		F	A	Y	T	K	A	G	E	A	Y	R	G	Y	A	Y	K	T	K	V	L	K	T	F	G	A	G	D	S	Y	A	S	A	F	L	Y	A	L	I	S	G	K	G	I	E	T	A	L	K	Y	G	S	A	S	A	S	I	V	V	S	K	.	.	.	A	X	P	S	V	E	E	I	E	A	L	I	E	K	D	E	T
Template Known Secondary structure						T	T	S								B					S			T	T															T	T																					.	.	.															T		B
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions