Phyre 2 alignment of P06999 with c1tz6B

Job Description P06999
Confidence 100.00% Date Thu Jan 5 10:59:52 GMT 2012

Rank 37 Aligned Residues 277

% Identity 21% Template c1tz6B_

PDB info PDB header:transferase Chain: B: PDB Molecule:putative sugar kinase; PDBTitle: crystal structure of aminoimidazole riboside kinase from2 salmonella enterica complexed with aminoimidazole riboside3 and atp analog

Resolution 2.70 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence	V	R	I	Y	T	L	T	L	A	P	S	L	D	S	A	T	I	T	P	Q	I	Y	P	E	G	K	L	R	C	T	A	P	V	F	E	P	G	G	G	G	I	N	V	A	R	A	I	A	H	L	G	G	S	A	T	A	I	F	P	A	G	G	A	.	T	G	E	H	L	V	S	L	L	A	D	E	N	V	P	V
Query Conservation																																																																.
Alig confidence								.													.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation								.													.	.	.	.	.	.	.	.	.	.
Template Sequence	N	K	V	W	V	I	G	.	D	A	S	V	D	L	V	P	E	K	Q	N	.	.	.	.	.	.	.	.	.	.	S	Y	L	K	C	P	G	G	A	S	A	N	V	G	V	C	V	A	R	L	G	G	E	C	G	F	I	G	C	L	G	D	D	D	A	G	R	F	L	R	Q	V	F	Q	D	N	G	V	D	V
Template Known Secondary structure								.										S	T	T	.	.	.	.	.	.	.	.	.	.																			T	T	T											S	S													T	T
Template Predicted Secondary structure								.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
	5	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence	A	T	V	E	A	K	D	W	T	R	Q	N	L	H	V	H	V	E	A	S	G	E	Q	Y	R	F	V	M	P	G	A	A	L	N	E	D	E	F	R	Q	L	E	E	Q	V	L	E	I	E	S	G	A	I	L	V	I	S	G	.	S	L	P	P	G	V	K	L	E	K	L	T	Q	L	I	S	A	A	Q	K	Q
Query Conservation																																																											.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.
Template Sequence	T	F	L	R	L	D	A	D	L	T	S	A	V	L	I	V	.	.	.	.	.	.	.	.	.	.	N	F	T	Y	L	V	H	P	G	A	D	T	Y	V	S	P	Q	D	L	P	P	F	R	Q	Y	E	W	F	Y	F	S	S	I	G	L	T	D	R	P	A	R	E	A	C	L	E	G	A	R	R	M	R	E	A
Template Known Secondary structure							S	S	S								.	.	.	.	.	.	.	.	.	.				B			S	S		G	G	G	G			G	G	G						T	T							G	G	G	G	S	S																	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.											90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.											.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.
Query Sequence	G	I	R	C	I	V	D	S	S	G	E	A	L	S	A	A	.	.	.	.	.	.	.	.	.	.	L	A	I	G	N	I	E	L	V	K	P	N	Q	K	E	L	S	A	L	V	N	R	E	L	T	Q	P	D	D	V	R	K	A	A	Q	E	I	V	N	S	G	K	A	K	R	V	V	V	S	L	G	P	Q	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence	G	G	Y	V	L	F	D	V	N	L	R	S	K	M	W	G	N	T	D	E	I	P	E	L	I	A	R	S	A	A	L	A	S	I	C	K	V	S	A	D	E	L	C	Q	L	S	G	A	S	H	W	Q	D	.	.	.	.	.	.	A	R	Y	Y	L	R	D	L	G	C	D	T	T	I	I	S	L	G	A	D	G
Template Known Secondary structure	T											G	G	G		S	S	T	T														S																S	S	G	G	G	.	.	.	.	.	.	S	T	T					T	T		S							G	G	G
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
	152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																											.	.	.	.	.																						.	.
Query SS confidence																																											.	.	.	.	.																						.	.
Query Sequence	A	L	G	V	D	S	E	N	C	I	Q	V	V	P	P	P	V	K	S	Q	S	T	V	G	A	G	D	S	M	V	G	A	M	T	L	K	L	A	E	N	A	S	.	.	.	.	.	L	E	E	M	V	R	F	G	V	A	A	G	S	A	A	T	L	N	Q	G	T	.	.	R	L	C	S	H	D	D	T	Q	K
Query Conservation																																											.	.	.	.	.																						.	.
Alig confidence																																											.	.	.	.	.																						.	.
Template Conservation
Template Sequence	A	L	L	I	T	A	E	G	E	F	H	F	P	A	P	R	V	D	V	V	D	T	T	G	A	G	D	A	F	V	G	G	L	L	F	T	L	S	R	A	N	C	W	D	H	A	L	L	A	E	A	I	S	N	A	N	A	C	G	A	M	A	V	T	A	K	G	A	M	T	A	L	P	F	P	D	Q	L	N	T
Template Known Secondary structure						T	T													S			T	T														T	T	S	S	S																							S	S	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
	226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

	303	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence	F	L	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	306	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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