Job Description Q47685 Confidence 29.77% Date Thu Jan 5 12:37:01 GMT 2012 Rank 25 Aligned Residues 90 % Identity 12% Template c2znrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amsh-like protease; PDBTitle: crystal structure of the dub domain of human amsh-lp Resolution 1.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																									.	.																						.	.	.	.										.
Query SS confidence																									.	.																						.	.	.	.										.
Query Sequence		G	V	A	F	T	S	T	H	A	V	R	E	W	L	R	L	H	M	A	A	L	E	R	.	.	E	E	F	R	V	L	Y	L	D	N	Q	N	Q	L	I	A	H	E	T	L	F	.	.	.	.	T	G	T	I	N	R	T	E	V	.	H	P	R	E	V	V	K	R	A	L	H	F	N	A	A	A	V	I	L	A
Query Conservation																									.	.																						.	.	.	.										.
Alig confidence																									.	.																						.	.	.	.										.
Template Conservation
Template Sequence		R	C	V	V	L	P	E	D	L	C	H	K	F	L	Q	L	A	E	S	N	T	V	R	G	I	E	T	C	G	I	L	C	G	K	L	T	H	N	E	F	T	I	T	H	V	I	V	P	K	Q	S	A	G	P	D	Y	C	D	M	E	N	V	E	E	L	F	N	V	Q	D	Q	H	D	L	L	T	L	G	W	I
Template Known Secondary structure								T	T														T	T	T													T	T																T	T																		T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	H	P	S	G	E	T	T	P	S	Q	A	D	K	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	T	H	P	T	Q	T	A	F	L	S	S	V	D	L	H	T
Template Known Secondary structure					S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions