Job Description P52060 Confidence 8.48% Date Thu Jan 5 12:05:05 GMT 2012 Rank 80 Aligned Residues 71 % Identity 10% Template c2gzvA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:prkca-binding protein; PDBTitle: the cystal structure of the pdz domain of human pick1 (casp target) Resolution 1.12 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	V	N	D	D	G	L	V	L	R	L	Y	I	Q	P	K	A	S	R	D	S	I	V	G	L	H	G	D	E	V	K	V	A	I	T	A	P	P	V	D	G	Q	A	N	S	H	L	V	K	F	L	G	K	Q	F	R	V	A	K	S	Q	V	V	I	E	K	G	E	L	G	R	H	K	Q
Query Conservation
Alig confidence																																																								.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		I	G	G	G	A	Q	P	C	L	Y	I	V	Q	V	F	D	N	T	P	A	A	L	D	G	T	V	A	A	G	D	E	I	T	G	V	N	G	R	S	I	K	G	K	T	K	V	E	V	A	K	M	I	Q	E	.	.	.	.	V	K	G	E	V	T	I	H	Y	N	K	L	Q	Y	Y	K	V
Template Known Secondary structure																	T	T	S										T	T							T	T				T	T													.	.	.	.			S
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions