 |
| Job Description | P52060 | | Confidence | 14.88% | Date | Thu Jan 5 12:05:05 GMT 2012 |
| Rank | 54 | Aligned Residues | 32 |
| % Identity | 19% | Template | c1sb7A_ |
| PDB info |
PDB header:lyase | Chain: A: PDB Molecule:trna pseudouridine synthase d; |
PDBTitle: crystal structure of the e.coli pseudouridine synthase trud
|
| Resolution | 2.20 Å |
|
|   |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | G | Q | A | N | S | H | L | V | K | F | L | G | K | Q | F | R | V | A | K | S | Q | V | V | I | E | K | G | E | L | G | R | H |
| Query Conservation |   |
  |
|
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |
|   |
|
|   |
|   |
|   |   |
|   |
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |
|   |   |
|
|   |   |
|
|
|   |
|
|
|   |   |   |   |
|   |
| . |
|
|   |
|
|
|   |
| Template Sequence |   |
N | G | C | N | T | R | F | V | A | D | A | L | A | K | F | L | K | I | H | A | R | E | V | S | F | . |
A | G | Q | K | D | K | H |
| Template Known Secondary structure |   |
 | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| G | G | G |  |  |
| . | S |
|
|
|
| T | T |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . |
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
. | . | . | . | 80 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|