Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAY4
Confidence1.22%DateThu Jan 5 11:14:07 GMT 2012
Rank69Aligned Residues11
% Identity36%Templatec3cueO_
PDB info PDB header:protein transportChain: O: PDB Molecule:transport protein particle 18 kda subunit; PDBTitle: crystal structure of a trapp subassembly activating the rab2 ypt1p
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40
Predicted Secondary structure 




Query SS confidence 










Query Sequence  PSGYKVVVVPD
Query Conservation 









 
Alig confidence 










Template Conservation   

 



 

Template Sequence  ASGLWFVLLSD
Template Known Secondary structure  SS



Template Predicted Secondary structure 




Template SS confidence 










   83......90...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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