Return to main results Retrieve Phyre Job Id

Job DescriptionP52119
Confidence52.04%DateThu Jan 5 12:05:25 GMT 2012
Rank44Aligned Residues61
% Identity13%Templated2fy8a2
SCOP infoTrkA C-terminal domain-like TrkA C-terminal domain-like TrkA C-terminal domain-like
Resolution2.79

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30 .........40.........50.........60.........70..
Predicted Secondary structure 









.



















Query SS confidence 


















.









































Query Sequence  ALPEKQYLQRVTLQEGATV. EEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRV
Query Conservation 
 
  
    
 
  



.  

  



   




    





    
  
  



Alig confidence 


















.









































Template Conservation           

 
   
 





 

 
     
 



 
       
     
  

 
Template Sequence  AEESTRRMVEVPIPEGSKLEGVSVLDADIHDVTGVIIIGVGRGDELIIDPPRDYSFRAGDII
Template Known Secondary structure  TS
SS


SSSTTTT
B
S
TTS

TT
B

TT
Template Predicted Secondary structure 


































Template SS confidence 





























































   257..260.........270.........280.........290.........300.........310........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions