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4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
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. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
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50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | I | A | V | E | V | A | Y | A | L | P | E | K | Q | Y | . |
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L | Q | R | V | T | L | Q | E | G | A | T | V | E | E | A | I | R | A | S | G | L | L | E | L | R | T | D | I | D | L | T | . |
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K | N | K | V | G | I | Y | S | R | P | A | K | L | S | D | S | V | H | D | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   | . | . |
|   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |
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Template Sequence |   |
S | V | K | V | K | V | K | Y | F | A | R | F | R | Q | L | A | G | V | D | E | E | E | I | E | L | P | E | G | A | R | V | R | D | L | I | E | E | . |
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I | K | K | R | H | E | K | F | K | E | E | V | F | G | E | G | Y | D | E | D | A | D | V | N | I | A | V | N | G | R | Y | V | S | W | D | E | E | L | K | D | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
| T |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |
| T | T |
| B |  |  |  |  |  |  |  | . | . |  |  |  |  |
| G | G | G | G | G | S |
| B |
| S | S | S |
| T | T | S | S | B |  |  |  |  | T | T | B |
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| T | T |
| B |
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| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
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|  |  |  |  |  |  |  | . | . |  |  |  |  |
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|  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
D | R | V | E | I | Y | R | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
|
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|   |
|
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Template Sequence |   |
D | V | V | G | V | F | P | P |
Template Known Secondary structure |   |
|  |  |  |  |  | S |
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Template Predicted Secondary structure |   |
|  |  |  |  |  |
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Template SS confidence |   |
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  |   |
79 | 80 | . | . | . | . | . | . |
  |