Job Description P39304 Confidence 97.18% Date Thu Jan 5 11:59:08 GMT 2012 Rank 208 Aligned Residues 202 % Identity 14% Template d2btma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.40

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		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.					.
Predicted Secondary structure													.																																																		.	.	.												.	.	.	.
Query SS confidence													.																																																		.	.	.												.	.	.	.
Query Sequence		S	L	P	M	L	Q	V	A	L	D	N	.	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	.	.	.	D	A	K	I	A	D	A	G	K	I	L	.	.	.	.	S
Query Conservation													.																																																		.	.	.												.	.	.	.
Alig confidence													.																						.																												.	.	.												.	.	.	.
Template Conservation																																			.
Template Sequence		R	K	P	I	I	A	G	N	W	K	M	N	G	T	L	A	E	A	V	Q	F	V	E	D	V	K	G	H	V	P	P	A	D	.	E	V	I	S	V	V	C	A	P	F	L	F	L	D	R	L	V	Q	A	A	D	G	T	D	L	K	I	G	A	Q	T	M	H	F	A	D	Q	G	A	Y	T	G	E	V	S	P
Template Known Secondary structure												S															T	T	T	S			T	T	.	T									G	G	G									T	T	S	S						S				S	S	S	S	S	S		T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.								.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																			.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	M	C	F	E	A	N	A	D	W	V	T	V	.	.	.	.	.	.	.	I	C	C	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	R	D	A
Query Conservation															.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		V	M	L	K	D	L	G	V	T	Y	V	I	L	G	H	S	E	R	R	Q	M	F	A	E	T	D	E	T	V	N	K	K	V	L	A	A	F	T	R	G	L	I	P	I	I	.	C	C	G	E	S	L	E	E	R	E	A	G	Q	T	N	A	V	V	A	S	Q	V	E	K	A	L	A	G	L	T	P	E	Q	V
Template Known Secondary structure								T							S								S																		T						.											T	T															T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	.	.	.	.	.	.	.	.	.	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	I	H	V	F	I	A	G	R	S	I	R	D
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		K	Q	A	V	I	A	Y	E	P	I	W	A	I	G	T	G	K	S	S	T	P	E	D	A	N	S	V	C	G	H	I	R	S	V	V	S	R	L	F	G	P	E	A	A	E	A	I	R	I	Q	Y	G	G	S	V	K	P	D	N	I	R	D	F	L	A	Q	Q	Q	I	D	G	A	L	V	G	G	A	S	L	E
Template Known Secondary structure		T	T								G	G	G	T	T	T	S																													T	T	S						S	S			T	T	T						T	S	T	T							S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	P	V	E	A	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	S	F	L	Q	L	V	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions