Job Description P39304 Confidence 97.73% Date Thu Jan 5 11:59:08 GMT 2012 Rank 181 Aligned Residues 212 % Identity 13% Template d2b4ga1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.95

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		M	S	L	P	M	L	Q	V	A	L	D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	.	.	.	P
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		F	S	N	P	F	M	N	A	A	G	V	L	C	T	T	E	E	D	L	R	R	M	T	E	S	E	S	G	S	L	I	G	K	S	C	T	L	A	P	R	T	G	N	P	E	P	R	Y	F	G	L	P	L	G	S	I	N	S	M	G	L	P	N	L	G	V	D	F	Y	L	S	Y	A	A	Q	T	H	D	Y	S
Template Known Secondary structure			S	S	S					T	T	S	S		S	S										S	S		S									S	S		B			S		S							T	T										B	S												T			T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.													.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	.	.	.	.	.	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	.	.	.	.	.	.	.	.	.	.	.	.	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T
Query Conservation																			.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	P	L	F	L	S	M	S	G	L	S	V	E	E	S	V	E	M	V	K	K	L	V	P	I	T	K	E	K	G	T	I	L	E	L	N	L	S	C	P	N	V	P	G	K	P	Q	V	G	Y	D	F	D	T	T	R	T	Y	L	Q	K	V	S	E	A	Y	G	L	P	F	G	V	K	M	P	P	Y	F	D
Template Known Secondary structure		T										S	S																															S	T	T				G	G	G																		S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
							119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		.	.	.	.	.	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	.	.	M	G	F	K	V	T	V	T	G	G
Query Conservation		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		I	A	H	F	D	M	A	A	A	V	L	N	D	F	P	L	V	K	F	I	T	C	V	N	S	I	G	N	G	L	V	I	D	P	A	N	E	T	V	V	I	K	P	K	Q	G	F	G	G	L	G	G	K	Y	V	L	P	T	A	L	A	N	V	N	A	F	F	R	R	C	P	D	K	L	V	F	G	C	G	G
Template Known Secondary structure													T	T		T	T																		T	T	T	T			S			G	G	G	G							G	G	G																T	T	S						S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		172		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		L	.	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E	L
Query Conservation			.
Alig confidence			.																											.	.
Template Conservation																														.	.
Template Sequence		V	Y	S	G	E	E	A	F	L	H	I	L	A	G	A	S	M	V	Q	V	G	T	A	L	H	D	E	G	.	.	P	I	I	F	A	R	L	N	K	E	L	Q	E	I
Template Known Secondary structure				S											T							S								.	.	T	T
Template Predicted Secondary structure																														.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions