Job Description P39304 Confidence 96.77% Date Thu Jan 5 11:59:08 GMT 2012 Rank 234 Aligned Residues 197 % Identity 13% Template d1twda_ SCOP info TIM beta/alpha-barrel CutC-like CutC-like Resolution 1.70

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																						.	.	.																							.	.	.	.	.	.												.	.
Query SS confidence																																						.	.	.																							.	.	.	.	.	.												.	.
Query Sequence		P	M	L	Q	V	A	L	D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	.	.	.	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	.	.	.	.	.	.	D	A	K	I	A	D	A	G	K	I	L	.	.
Query Conservation																																						.	.	.																							.	.	.	.	.	.												.	.
Alig confidence										.	.								.	.	.																	.	.	.																							.	.	.	.	.	.												.	.
Template Conservation										.	.								.	.	.
Template Sequence		A	L	L	E	I	C	C	Y	.	.	S	X	E	C	A	L	T	.	.	.	A	Q	Q	N	G	A	D	R	V	E	L	C	A	A	P	K	E	G	G	L	T	P	S	L	G	V	L	K	S	V	R	Q	R	V	T	I	P	V	H	P	I	I	R	P	R	G	G	D	F	C	Y	S	D	G	E	F	A	A	I	L
Template Known Secondary structure									S	.	.	S							.	.	.				T	T		S						B		G	G	G	T		B																S					B			S	S	S	S		S
Template Predicted Secondary structure										.	.								.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.			10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
				73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.																					.	.	.	.	.																							.	.	.
Query SS confidence		.	.																					.	.	.	.	.																							.	.	.
Query Sequence		.	.	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	D	I	.	.	.	.	.	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	.	.	.	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q
Query Conservation		.	.																					.	.	.	.	.																							.	.	.
Alig confidence		.	.																					.	.	.	.	.												.	.										.	.	.																						.	.	.	.	.	.	.
Template Conservation																																								.	.																																		.	.	.	.	.	.	.
Template Sequence		E	D	V	R	T	V	R	E	L	G	F	P	G	L	V	T	G	V	L	D	V	D	G	N	V	D	X	P	R	X	E	K	I	X	A	A	A	G	.	.	P	L	A	V	T	F	H	R	A	F	D	X	C	A	N	P	L	Y	T	L	N	N	L	A	E	L	G	I	A	R	V	L	T	.	.	.	.	.	.	.
Template Known Secondary structure										T	T		S							B		T	T	S	S	B													T	.	.	T	S						G	G	G	G	G		S													T							.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.																																		.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.												.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	.	.	.	.	.	.	.	.	.	.	.	S	P	V	E	A	A	R	Q	F	K	R
Query Conservation																						.	.																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	Q	K	S	D	A	L	Q	G	L	S	K	I	X	E	L	I	A	H	R	D	A	P	I	I	X	A	G	A	G	V	R	A	E	N	L	H	H	F	L	D	A	G	V	L	E	V	H	S	S	A	G	A	W	Q	A	S	P	X	R	Y	R	N	Y	S	R	Y	I	V	D	G	A	A	V	A	E	X	K	G
Template Known Secondary structure			T	T	S	S	S	T	T	T	T									T	S	S	S								S	S			T	T	T								T		S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	E	R	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions