Job Description P39304 Confidence 97.82% Date Thu Jan 5 11:59:08 GMT 2012 Rank 175 Aligned Residues 147 % Identity 16% Template d1tv5a1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.40

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.											.	.	.	.	.	.	.	.	100	.	.	.	.															.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.												.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																.	.												.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		D	A	G	K	I	L	S	R	M	C	F	E	A	N	.	.	A	D	W	V	T	V	I	C	C	A	D	.	.	.	.	.	.	.	.	.	.	I	N	T	A	K	G	A	L	D	V	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	.	.
Query Conservation																.	.												.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence																.	.												.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		N	I	V	D	D	L	K	Y	C	I	N	K	I	G	R	Y	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	D	L	N	Q	E
Template Known Secondary structure															G	G	G		S									T	T	S	T	T	G	G	G	G	G	S																								S	S	S	S	S										S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
				119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.									.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.																				.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																									.
Query SS confidence		.	.																				.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																									.
Query Sequence		.	.	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	.	.	.	.	.	.	.	.	S	R	D	A	Q	A	A	G	V	A	W	.	.	.	.	.	.	.	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	.	A	L	E	D	L	P	L	F
Query Conservation		.	.																				.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																									.
Alig confidence		.	.																				.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G	I	F	S	G	L	D	A	L	E	K
Template Known Secondary structure													T	T		S								B	S						G	G	G	T	T			S																						T	T	T		S						S	S			S
Template Predicted Secondary structure
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure															.							.
Query SS confidence															.							.
Query Sequence		K	G	I	P	I	H	V	F	I	A	G	R	S	.	I	R	D	A	A	S	.	P	V	E	A	A	R	Q	F	K	R	S	I	A	E
Query Conservation															.							.
Alig confidence															.							.
Template Conservation
Template Sequence		I	E	A	G	A	S	V	C	Q	L	Y	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	K	R	E	L	N	H	L	L	Y	Q
Template Known Secondary structure				T	T							S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions