Job Description P39304 Confidence 99.93% Date Thu Jan 5 11:59:08 GMT 2012 Rank 41 Aligned Residues 204 % Identity 14% Template d1tqja_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel D-ribulose-5-phosphate 3-epimerase Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.				.	.
Query SS confidence																																			.	.	.				.	.
Query Sequence		P	M	L	Q	V	A	L	D	N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	.	.	.	I	L	C	.	.	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	S	R	M	C	F	E
Query Conservation																																			.	.	.				.	.
Alig confidence					.																		.	.											.	.	.				.	.															.																		.
Template Conservation					.																		.	.																																	.																		.
Template Sequence		P	S	I	.	L	S	A	D	F	S	R	L	G	E	E	I	K	A	V	D	E	.	.	A	G	A	D	W	I	H	V	D	V	M	D	G	R	F	V	P	N	I	T	I	G	P	L	I	V	D	A	I	R	P	L	.	T	K	K	T	L	D	V	H	L	M	I	V	E	P	E	K	Y	.	V	E	D	F	A	K
Template Known Secondary structure			B	G	.	G	G	S		G	G	G											.	.	T	T		S								B	S	S	S	S	S		B											G	G	G	.			S								S	S	S	G	G	G	T	.
Template Predicted Secondary structure					.																		.	.																																	.																		.
Template SS confidence
		9	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		A	N	A	D	W	V	T	V	I	C	C	A	.	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		A	G	A	D	I	I	S	V	H	V	E	H	N	A	S	P	H	L	H	R	T	L	C	Q	I	R	E	L	G	K	K	A	G	A	V	L	N	P	S	T	P	L	D	F	L	E	Y	V	L	P	V	C	D	L	I	L	I	M	S	V	N	P	Q	S	F	I	P	E	V	L	P	K	I	R	A	L	R	Q	M	C
Template Known Secondary structure			T		S							S	T	T	T		T	T											T	T									T	T			G	G	G	G	T	T	T	G	G	G		S						S	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	R	G	L	D	P	W	I	E	V	D	G	G	L	K	P	N	N	T	W	Q	V	L	E	A	G	A	N	A	I	V	A	G	S	A	V	F	N	A	P	N	Y	A	E	A	I	A	G	V	R	N	S	K	R
Template Known Secondary structure					T									S	S			T	T	T	T							T							S					T	S	S											T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions