Job Description P39304 Confidence 98.49% Date Thu Jan 5 11:59:08 GMT 2012 Rank 117 Aligned Residues 165 % Identity 12% Template d1tb3a1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																											.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	D	A	K	I	A	D	A	G	K	I	L	.	.	.	S	R	M	C	F	E	A	N	A	D	W	V	T	V	I	C	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	N	T	A	K	G
Query Conservation																												.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	D	I	V	A	A	A	P	E	G	F	R	W	F	Q	L	Y	M	K	S	D	W	D	F	N	K	Q	M	V	Q	R	A	E	A	L	G	F	K	A	L	V	I	T	I	D	T	P	V	L	G	N	R	R	R	D	K	R	N	Q	L	N	L	E	A	K	D	L	R	A	L	K	E	A	S	F	C	W	N	D
Template Known Secondary structure									S	T	T											S		T	T													T									S		S	S										T	T								S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q	A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	G	F	K	V	T	V	T	G	G	L	.	A	L	E	D
Query Conservation																																																																													.
Alig confidence																			.	.																																																									.
Template Conservation																			.	.
Template Sequence		L	S	L	L	Q	S	I	T	R	L	P	I	I	L	K	G	I	.	.	L	T	K	E	D	A	E	L	A	M	K	H	N	V	Q	G	I	V	V	S	N	H	G	G	R	Q	L	D	E	V	S	A	S	I	D	A	L	R	E	V	V	A	A	V	K	G	K	I	E	V	Y	M	D	G	G	V	R	T	G	T	D
Template Known Secondary structure							T	T			S								.	.		S										T	T		S							G	G	G	T	S	S		S	S															T	T	S	S						S	S			S
Template Predicted Secondary structure																			.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		L	P	L	F	K	G	I	P	I	H	V	F	I	A	G	R	S	I	R	D	A	.	.	A	S	P	V	E	A	A	R	Q	F	K	R	S	I	A	E
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		V	L	K	A	L	A	L	G	A	R	C	I	F	L	G	R	P	I	L	W	G	L	A	C	K	G	E	D	G	V	K	E	V	L	D	I	L	T	A
Template Known Secondary structure								T	T		S					S
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions