Job Description P39304 Confidence 96.60% Date Thu Jan 5 11:59:08 GMT 2012 Rank 242 Aligned Residues 179 % Identity 17% Template d1sw3a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.03

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																				.	.												.	.	.	.
Query SS confidence																																																				.	.												.	.	.	.
Query Sequence		N	Q	T	M	D	S	A	Y	E	T	T	R	L	I	A	E	E	V	D	I	I	E	V	G	T	I	L	C	V	G	E	G	V	R	A	V	R	D	L	K	A	L	Y	P	H	K	I	V	L	A	.	.	D	A	K	I	A	D	A	G	K	I	L	.	.	.	.	S	R	M	C	F	E	A	N	A	D	W	V	T
Query Conservation																																																				.	.												.	.	.	.
Alig confidence																					.	.																														.	.												.	.	.	.
Template Conservation																					.	.
Template Sequence		N	G	D	K	K	S	L	G	E	L	I	H	T	L	N	G	A	K	L	.	.	S	A	D	T	E	V	V	C	G	A	P	S	I	Y	L	D	F	A	R	Q	K	L	D	A	K	I	G	V	A	A	Q	N	C	Y	K	V	P	K	G	A	F	T	G	E	I	S	P	A	M	I	K	D	I	G	A	A	W	V	I
Template Known Secondary structure																		S			.	.		T	T									G	G	G								S		T	T	S					S				S	S	S	S	S	S		T	T										T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		86	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure						.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	C	C	.	.	.	.	.	.	.	A	D	I	N	T	A	K	G	A	L	D	V	A	K	E	F	N	G	D	V	Q	I	E	L	T	G	Y	W	T	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	Q	Q	W	R	D	A	G	I	G	Q	V	V	Y	H	R	S	R	D	A	Q
Query Conservation						.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																							.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.
Template Sequence		L	G	H	S	E	R	R	H	V	F	G	E	S	D	E	L	I	G	Q	K	V	A	H	A	L	A	E	G	L	G	V	I	A	.	C	I	G	E	K	L	D	E	R	E	A	G	I	T	E	K	V	V	F	E	Q	T	K	A	I	A	D	N	V	K	D	W	S	K	V	V	L	A	Y	E	P	V	W	A	I	G
Template Known Secondary structure			S							T	S																	T	T						.											T	T															T	T		S		G	G	G								G	G	G	S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		A	A	G	V	A	W	G	E	A	D	I	T	A	I	K	R	L	S	D	M	.	.	.	.	.	.	.	.	.	.	.	G	F	K	V	T	V	T	G	G	L	A	L	E	D	L	P	L	F	K	G	I	.	P	I	H	V	F	I	A	G	R	S
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		T	G	K	V	A	T	P	Q	Q	A	Q	E	V	H	E	K	L	R	G	W	L	K	S	H	V	S	D	A	V	A	Q	S	T	R	I	I	Y	G	G	S	V	T	G	G	N	C	K	E	L	A	S	Q	H	D	V	D	G	F	L	V	G	G	A
Template Known Secondary structure		S	S																							T														S	S			T	T	T						T	S	T	T							S	G	G
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions